Serpula lacrymans: SERLADRAFT_476100
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Entry
SERLADRAFT_476100 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
sla
Serpula lacrymans
Pathway
sla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SERLADRAFT_476100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_476100
03016 Transfer RNA biogenesis [BR:
sla03016
]
SERLADRAFT_476100
Enzymes [BR:
sla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SERLADRAFT_476100
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
SERLADRAFT_476100
Transfer RNA biogenesis [BR:
sla03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
SERLADRAFT_476100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
DNA_pol_B_palm
PAP_NTPase
Polbeta
BetaGal_ABD_1
Motif
Other DBs
NCBI-GeneID:
18820745
NCBI-ProteinID:
XP_007322161
JGI:
476100
UniProt:
F8P6Y8
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MDTLPSKPPSGPRNSTDNSRRARRQRERDKKPKSNHETGSSHRRDEKEKETKDRSKEGGK
GKQKEKEKVGNLLNINPPANGELGDDFIPFILSDASASDEEMSHRDDHSRSRASVREWDK
GKSREHDRDGGRHSTGGKRKHDAISDEEDDWRYRRRRMEPPAASRSAPWISSINWDKCNN
VPEMLHREVEAFVNYMSPSPVEDEIRGLVISLVTKAVSSAFPDAQVLPFGSYETKLYLPD
GDIDLVIQSESMAYSNKVTVLHALANTLKRAKITSKVTIIAKAKVPIVKFVTNHGRLNVD
ISINQGNGVIAGKIVNGFLKDMHGCGFALRSLVMITKAFLNQRGMNEVYTGGLGSYSIVC
LAISFLQMHPKIRSGEIDAEKNLGVLVMEFFELYGCYFNYEEVGISVRKGGTYFNKRQRG
WYDFYKTNLLSIEDPTEPSNDISKGSFGIAKVRQTLAGAHGIMTSTSFLRAGILGSRREG
RSYSLRNNHYPEDMSILSSILGVTQETINHRLLLQEVYDEMVLHRLLGVIPRASEYTDVS
IDGPQVSKTSSKPNSQSARGAKSVKEAWKEADAERSEEVAVEVQNGVHGSRR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatacacttccctcaaaaccaccaagtgggcctcgcaattccacggataacagtagg
cgagcacgaagacagcgggagagggataagaaaccgaagagcaaccacgaaacaggatcg
tcacatagacgcgatgagaaggaaaaggagacaaaagataggtccaaggagggaggaaag
ggaaaacagaaagaaaaggaaaaggttggaaacctactgaacattaaccccccggccaat
ggcgagcttggggatgatttcataccattcatcctgagtgatgcttccgcttctgacgag
gaaatgtctcacagagacgatcactcgcgctctcgtgcttccgttcgagaatgggacaaa
ggtaaatctagagagcacgacagggatggaggtcgtcattctactggagggaaacgcaaa
cacgatgccatctctgacgaagaggacgattggcgttatagacggcggagaatggagcct
cctgcagcttcgcggagcgccccttggatttcttccataaattgggacaaatgcaataat
gtgccagagatgttgcaccgtgaagttgaagcatttgtcaactacatgtcaccctcgcct
gtggaagacgaaatccgtgggctagtgatcagtctagtcacaaaggctgtttcttctgca
tttccagacgcacaagtgctacctttcggcagctatgaaaccaaactctatcttccagat
ggtgatattgatttagtgattcaatccgagtctatggcctacagcaacaaagttactgtt
ctccatgcccttgccaacaccctaaaacgcgcaaaaataacttccaaagttactatcatt
gccaaagccaaagtgcccattgtcaaattcgtcaccaaccatggcagacttaatgttgat
atcagcatcaatcaaggcaacggtgtcatcgctgggaagattgtcaatggttttctcaaa
gacatgcatggctgcggttttgcattgcggagtcttgtgatgatcacgaaagcatttttg
aatcaacgtggtatgaatgaggtttatacagggggcttgggaagttacagcatagtgtgt
ctcgcaattagctttttacagatgcatccgaaaatacgtagcggtgaaatcgacgcggag
aagaacttgggagttctggtgatggagttcttcgagctctatggatgttatttcaactac
gaggaggtagggatttcggttaggaagggagggacatatttcaataagaggcaaagagga
tggtacgatttctataaaacaaacttattatcgattgaagaccctactgaaccttcaaat
gacatatcgaagggctcattcggtatcgctaaggttcggcagacgttggcgggagctcac
ggaataatgacgagtacatcatttcttcgagctggtattctcggttcccgtagggaagga
cgctcatactccttacggaataaccattatccagaagatatgagtatattatcaagtatc
ttgggcgttacgcaggagacaatcaaccatcgccttctcctgcaagaagtttatgatgag
atggtactacatcggttactgggcgtgataccacgagcttcagaatatactgatgtctct
atcgacggaccccaggtatcaaaaacatcatcaaaaccaaattcccaatcagcacgagga
gcgaagagcgtcaaggaagcatggaaagaggccgatgcagagcgctccgaagaagtggcg
gtagaggtgcaaaacggtgttcatggtagtcgaagg
DBGET
integrated database retrieval system
