Stenotrophomonas lactitubi: AB9L18_17355
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Entry
AB9L18_17355 CDS
T10939
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slab Stenotrophomonas lactitubi
Pathway
slab00260
Glycine, serine and threonine metabolism
slab00460
Cyanoamino acid metabolism
slab00630
Glyoxylate and dicarboxylate metabolism
slab00670
One carbon pool by folate
slab00680
Methane metabolism
slab01100
Metabolic pathways
slab01110
Biosynthesis of secondary metabolites
slab01120
Microbial metabolism in diverse environments
slab01200
Carbon metabolism
slab01230
Biosynthesis of amino acids
slab01240
Biosynthesis of cofactors
slab04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
slab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB9L18_17355 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AB9L18_17355 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB9L18_17355 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AB9L18_17355 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB9L18_17355 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AB9L18_17355 (glyA)
Enzymes [BR:
slab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AB9L18_17355 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XGY85442
LinkDB
All DBs
Position
complement(3785259..3786512)
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AA seq
417 aa
AA seq
DB search
MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFDADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIV
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLIARGYKIVSGGTQNHLMLVDMIGKEVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYVEQDCVDLANWIADVLDAPADEAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccatcgcc
gctgagacccagcgccaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgagcagctggcgatcgac
cgcctcaagcagctgttcgacgcggactatgccaacgtgcagccgcacagcggttcgcag
gccaaccaggccgtgtacttcgcgctgctgcagccgggcgacaccatcctcggcatgagc
ctggcccacggcggccacctcacccacggcgccaaggtgaacgcctcgggcaagctgttc
aacgccgtgcagtacggcgtcaacgaccagggcctgatcgattacgacgaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtggctggcttctcggcctactcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcgcacgtcgccggcctggttgccgctggcgtctacccgagcccgctggaacatgcc
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtc
gccaagggcgccgacgaggacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccggcaaggcggtggccttcaaggaagcgttg
gagccgggcttcaaggcctaccagcagcaggtggtcaagaacgcccaggcgatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggcggcacccagaaccatctgatgctg
gtggacatgatcggcaaggaagtgtccggcaaggacgcggaagccgcgctgggcaaggcc
cacatcaccgtcaacaagaactcggtgccgaacgacccgcgttcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggcggtgaccacccgtggttacgtggaacaggactgcgtg
gacctggccaactggatcgccgacgtgctcgacgcgccggccgatgaagccgtgatcgcc
cgcgtgcgcgatgccgtcagcgcgcagtgccgcaagtacccggtctacggttga
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