Sulfurimicrobium lacus skT11: SKTS_12940
Help
Entry
SKTS_12940 CDS
T06796
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac00900
Terpenoid backbone biosynthesis
slac01100
Metabolic pathways
slac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SKTS_12940 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slac01006
]
SKTS_12940 (ispA)
Enzymes [BR:
slac01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SKTS_12940 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SKTS_12940 (ispA)
Prenyltransferases [BR:
slac01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SKTS_12940 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
BCB26408
UniProt:
A0A6F8V9M7
LinkDB
All DBs
Position
1314166..1315035
Genome browser
AA seq
289 aa
AA seq
DB search
MRQRQMRMEAVLEQLLPAPELAPQRLHQAMRYAALGGGKRVRPLLAYAAGELGGAPVERV
ETVAAAVELIHVYSLVHDDLPCMDDDDLRRGKPTCHVQFDEATALLVGDSLQSLAFQLVA
ERTIAHSAALQLELVRMLALAAGSRGMAGGQAIDLDSVGKSLTQTELEFMHMHKTGALIR
AAVLLGAHCGDGLEAEHLDAINHYAKCVGLAFQVVDDILDVEASTATLGKTAGKDAENNK
PTYVSILGLSDARNLAQELHQNALSALTGFGDKARRLVQLADFIVRRQS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagcgccagatgcgcatggaagccgtgctggaacagctgttgccggcgccggaa
ctggcgccgcagcgcctccatcaggcgatgcgctatgcggccctgggcggcggcaagcgg
gtgcgtccgctgctggcttatgccgccggcgagttgggcggcgcgccggtagaacgggtg
gaaaccgtggcggcggcggtggaactgatccacgtttattccctggtgcacgacgacctg
ccgtgcatggacgatgacgacctgcggcgcggcaagccgacctgccacgtgcagttcgac
gaggccaccgccctgctggtaggcgacagcctgcaaagtctcgcctttcagcttgtcgcg
gaacgtaccatcgcccacagcgcggcattgcagctggagttggtcaggatgctggcgctc
gccgccggttcgcgcggcatggccggcgggcaggcgatcgacctcgactcggtcggcaag
agcctgacgcagaccgagctcgagttcatgcacatgcacaagaccggcgccctgattcgc
gctgccgtgctgctcggggcgcattgcggcgatggcttggaggccgaacacctggatgcg
atcaatcattacgccaagtgcgtcggcctggcattccaggtggtggacgacattctcgat
gtggaagccagtaccgcgaccctgggtaagaccgccggcaaggatgcggagaataacaag
ccgacctatgtcagcattctcgggctgagcgatgcgcgcaacctggcgcaagaactgcac
cagaatgcactttctgcactgaccggtttcggcgataaggcgcgcaggctggtgcaactc
gccgatttcatcgtgcggcgccagtcctga
DBGET
integrated database retrieval system
