Sulfurimicrobium lacus skT11: SKTS_32610
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Entry
SKTS_32610 CDS
T06796
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac02024
Quorum sensing
slac03060
Protein export
slac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SKTS_32610 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SKTS_32610 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SKTS_32610 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slac02044
]
SKTS_32610 (ffh)
Enzymes [BR:
slac01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SKTS_32610 (ffh)
Secretion system [BR:
slac02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SKTS_32610 (ffh)
Eukaryotic Sec-SRP protein
SKTS_32610 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_16
AAA_22
CbiA
Zeta_toxin
AAA_30
AAA_31
APS_kinase
Helicase_RecD
AAA_14
AAA_18
Thymidylate_kin
YqeC
nSTAND3
AAA
CCC_C_1st_pro
AAA_33
Mg_chelatase
AAA_24
ABC_tran
cobW
6PF2K
TsaE
KTI12
AAA_5
PRK
Motif
Other DBs
NCBI-ProteinID:
BCB28375
UniProt:
A0A6F8VHY3
LinkDB
All DBs
Position
complement(3416572..3417924)
Genome browser
AA seq
450 aa
AA seq
DB search
MFDNLSQRLSGVIKTLRGQARLTEANIQDAMREVRMALLEADVALPVVKDFIAKVRERSL
GQEVMSSLTPGQAVVQVVYQELTLLMGDHNATLNLAARPPAVILLAGLQGAGKTTTAGKL
AKFLREQMKKKVLLTSCDVYRPAAIEQLRTLAQQLETDFFPSEVGQQPEKIALDALDFAR
KHFHDVVIVDTAGRLGIDEAMMDEIKRLHAALDPIETLFVVDAMQGQDAVNTAKAFSDAL
PLTGVILTKLDGDSRGGAALSVRQVTGKPIKFVGVGEKVAGLEPFYPDRMASRVLGMGDV
LSLIEDAQRGVDQDEAQKLAKKLKSGKSFDLEDFKQQMQQMKKMGGISALMDKLPGQLSQ
AAAGAQVDDKAIGRLEGIINSMTPQERRKPEILKAGRKRRIAAGAGVQVQEVNRLLSQFE
QTQKMMKMLSKGGGMAKMMRGMKGMLPGMR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaacctttcacagcgcctttccggcgttatcaagaccctgcgcggccaggcg
cggctgaccgaggccaacatccaggatgccatgcgcgaagtgcgcatggcattgctggag
gccgacgtggcgctgccggtggtgaaggatttcatcgccaaggtcagggaacgctccttg
ggccaggaggtcatgtccagcctcacccccggccaggcggtggtgcaggtggtgtaccag
gaactcaccctcctcatgggcgaccataacgccacactcaacctggcggcgcgcccgccg
gcagtcattctgctggcaggtttgcagggcgcgggcaaaaccacaacggccggcaagctg
gcgaagttcctgcgcgagcagatgaagaagaaagtcctgctgaccagttgcgacgtctac
cgtccggcggcgatcgagcagttgagaaccctggcgcagcaactggaaacggatttcttt
ccctccgaagtggggcagcaaccggaaaaaatcgcgctcgacgcactggattttgcgcgc
aagcatttccacgatgtggtgatcgtcgatactgccggccgtctgggcatcgacgaagcg
atgatggacgaaatcaagcgtctccatgccgcgctcgaccccatcgagacgctgttcgtg
gtggacgcgatgcaggggcaggacgcggtcaataccgccaaggccttcagcgacgcgctg
ccgcttaccggcgtgatcctcaccaagctggacggcgattcgcgcggcggtgcggcgctg
tcggtgcggcaggtgaccggcaagccgatcaagtttgtcggcgtgggcgaaaaggtcgca
ggcctggagccattttatcccgaccgcatggcttcgcgcgtgctcggcatgggggacgtg
ctgtcgctgatcgaggacgcgcagcgcggcgtggaccaggatgaggcgcagaagctggcg
aaaaaactcaagtctggcaagtcattcgacctggaagatttcaagcagcagatgcagcag
atgaagaaaatgggcggcatcagcgccctgatggacaaattgcccggccagttgagccag
gctgcggccggggcacaggtggacgataaagcgatcggtcgcctggaaggcatcatcaat
tccatgacgccgcaggagcggcgcaaaccggaaatcctcaaggccgggcgcaagcgccgc
attgccgcgggcgccggggtgcaggtgcaggaagtgaaccgcttgctcagccagttcgag
cagacgcagaaaatgatgaaaatgctatccaagggcggcggcatggcgaaaatgatgcgc
ggcatgaagggcatgctgccgggaatgcgataa
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