KEGG   Sulfurimicrobium lacus skT11: SKTS_35380
Entry
SKTS_35380        CDS       T06796                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
slac  Sulfurimicrobium lacus skT11
Pathway
slac00550  Peptidoglycan biosynthesis
slac01100  Metabolic pathways
slac01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:slac00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SKTS_35380 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SKTS_35380 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:slac01011]
    SKTS_35380 (mrdA)
Enzymes [BR:slac01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SKTS_35380 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:slac01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   SKTS_35380 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer bDLD3
Other DBs
NCBI-ProteinID: BCB28652
UniProt: A0A6F8VI86
LinkDB
Position
3664680..3666581
AA seq 633 aa
MKFGTEIRNHKRELYYFRLRLALSAAFVLFAFSLLGARLFYLQVMQHDHYQTLAENNRIS
IVPIVPNRGLILDRNGVPLANNYSAYTLEITPSKVDDLDATINSLAGIIDITSRDRKRFK
KLLEESKNFETLPIRSHLTEVEVAKFAVNRYRFPGVEIKARLFRHYPHMETFSHVVGHIG
RISEKDMERLDEEDVLSNYRGTDHIGKLGLEQSYEQQLHGVTGFEQVETDAGGRAVRTLA
RTPPTSGNTLYLSIDSKLQQIAVKAFGQFRGALVAIEPKSGEVLAFVSQPGFDPNLFVDG
IDAANWDAYNNSPDKPLNNRALRGQYPPGSTFKPFMALAGLELGKRTPSYTISDPGFYTL
PGSSHRYRDWKVGGHGSVDLRKSIVISCDTYYYGLAVDLGIDNITNFMSHFGFGRKSGID
IEGEQSGVLPSQAWKMKRFRQKWYTGDTVSVGIGQGYNLATPLQLAVATAALANNGQVMR
PHLVHSVQDSKTGQIRVLAPEARDTWPLKPENLDLVKAAMVDVTLPGGTASRAGAGAEYS
IAGKTGTAQVVAIKQGQKYIESQVAERNRDHALFIAFAPADKPRIAVAVLVENGGHGGST
AAPIARMVMDYYLLGKVPKEQLAPDAAEEPEHD
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgaagttcggcaccgaaatcaggaaccacaagcgggaactctattatttccggctgcgg
ctcgccctgagtgcggctttcgtgctgttcgccttttccttgctgggcgcacgcctgttc
tacctgcaggtcatgcagcacgatcattaccagacgctggccgagaacaaccgcatatcc
atcgtgcccatcgtgccgaatcgcggcttgatcctggaccgcaacggcgtgccgctggcg
aacaactattccgcctacaccctggaaatcacccccagcaaagtggacgatctcgacgcc
accatcaacagcctggccggcatcatcgacattaccagccgcgaccgcaagcgcttcaaa
aaactgctggaagagagcaagaatttcgagaccctgccgatccgctcgcacctcaccgaa
gtcgaggtggcgaaattcgctgtcaaccgctaccgcttccccggcgtcgagatcaaggct
cgcctgttccgtcattatccgcacatggaaaccttttcccacgtggtcggccacatcgga
cgcatcagcgaaaaagacatggagcgcctggatgaagaggacgttttatccaattatcgc
ggcaccgatcatatcggcaagctgggcctggaacaaagctacgagcagcaattgcacggc
gtaaccggcttcgaacaggtggaaaccgatgccggcgggcgcgcagtacgcaccctggcg
cgaacgcctccgacttccggcaacaccctctatctctccatcgacagcaaactgcagcaa
atcgccgtgaaagctttcggccagttccgcggcgccctggtagcgatcgagccgaaaagc
ggcgaagtgctggccttcgtcagccagccaggcttcgaccccaacctgttcgtcgacggc
atcgacgccgccaactgggacgcctataacaattcgcccgacaaaccgctcaacaaccgc
gccctgcgcggccagtacccgcccggctccaccttcaaaccgttcatggcgctggccggg
ctggagctaggcaaacgcacgccttcctacaccatctccgaccccggtttctacaccctg
cccggcagcagccaccgttaccgcgactggaaagtcggcggccacggctcggtggacctg
cgcaaatccatcgtcatctcgtgcgacacctactattacggcctggcggtagacctgggc
atcgacaacatcaccaacttcatgagccacttcggcttcggcaggaaatccggcatcgac
atcgaaggcgaacaatccggggtgctgccgtcgcaagcgtggaaaatgaagcgcttcagg
cagaagtggtacaccggcgacaccgtcagcgtcggcatcggccagggctacaacctcgcc
acaccgctgcaactggcggtggcgaccgccgcactggccaataacggccaggtcatgcgg
ccgcacctggtgcacagtgtccaggacagcaaaaccggccagatccgcgtcctggcgccg
gaagcccgcgacacctggccgctcaagccggaaaatctggacctggtgaaagccgcgatg
gtggatgtcacactccccggcggtaccgcctcacgcgccggcgcgggggcggaatacagc
atcgctggcaagaccggtaccgcccaggtggtcgccatcaaacagggacaaaaatacatc
gaaagccaggtcgcggagcgcaaccgcgatcatgccctgttcatcgcctttgcccccgcc
gacaagccaagaatcgccgtcgccgtgctggtggaaaacggcggccatggcggcagcacc
gcggcaccgatcgcgcgcatggtgatggactattacctgctgggcaaagtccccaaagaa
cagctcgcacccgacgcggcagaggagccggaacatgattag

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