Sulfurimicrobium lacus skT11: SKTS_35380
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Entry
SKTS_35380 CDS
T06796
Symbol
mrdA
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac00550
Peptidoglycan biosynthesis
slac01100
Metabolic pathways
slac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SKTS_35380 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SKTS_35380 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slac01011
]
SKTS_35380 (mrdA)
Enzymes [BR:
slac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SKTS_35380 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
slac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SKTS_35380 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
BCB28652
UniProt:
A0A6F8VI86
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All DBs
Position
3664680..3666581
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AA seq
633 aa
AA seq
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MKFGTEIRNHKRELYYFRLRLALSAAFVLFAFSLLGARLFYLQVMQHDHYQTLAENNRIS
IVPIVPNRGLILDRNGVPLANNYSAYTLEITPSKVDDLDATINSLAGIIDITSRDRKRFK
KLLEESKNFETLPIRSHLTEVEVAKFAVNRYRFPGVEIKARLFRHYPHMETFSHVVGHIG
RISEKDMERLDEEDVLSNYRGTDHIGKLGLEQSYEQQLHGVTGFEQVETDAGGRAVRTLA
RTPPTSGNTLYLSIDSKLQQIAVKAFGQFRGALVAIEPKSGEVLAFVSQPGFDPNLFVDG
IDAANWDAYNNSPDKPLNNRALRGQYPPGSTFKPFMALAGLELGKRTPSYTISDPGFYTL
PGSSHRYRDWKVGGHGSVDLRKSIVISCDTYYYGLAVDLGIDNITNFMSHFGFGRKSGID
IEGEQSGVLPSQAWKMKRFRQKWYTGDTVSVGIGQGYNLATPLQLAVATAALANNGQVMR
PHLVHSVQDSKTGQIRVLAPEARDTWPLKPENLDLVKAAMVDVTLPGGTASRAGAGAEYS
IAGKTGTAQVVAIKQGQKYIESQVAERNRDHALFIAFAPADKPRIAVAVLVENGGHGGST
AAPIARMVMDYYLLGKVPKEQLAPDAAEEPEHD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcggcaccgaaatcaggaaccacaagcgggaactctattatttccggctgcgg
ctcgccctgagtgcggctttcgtgctgttcgccttttccttgctgggcgcacgcctgttc
tacctgcaggtcatgcagcacgatcattaccagacgctggccgagaacaaccgcatatcc
atcgtgcccatcgtgccgaatcgcggcttgatcctggaccgcaacggcgtgccgctggcg
aacaactattccgcctacaccctggaaatcacccccagcaaagtggacgatctcgacgcc
accatcaacagcctggccggcatcatcgacattaccagccgcgaccgcaagcgcttcaaa
aaactgctggaagagagcaagaatttcgagaccctgccgatccgctcgcacctcaccgaa
gtcgaggtggcgaaattcgctgtcaaccgctaccgcttccccggcgtcgagatcaaggct
cgcctgttccgtcattatccgcacatggaaaccttttcccacgtggtcggccacatcgga
cgcatcagcgaaaaagacatggagcgcctggatgaagaggacgttttatccaattatcgc
ggcaccgatcatatcggcaagctgggcctggaacaaagctacgagcagcaattgcacggc
gtaaccggcttcgaacaggtggaaaccgatgccggcgggcgcgcagtacgcaccctggcg
cgaacgcctccgacttccggcaacaccctctatctctccatcgacagcaaactgcagcaa
atcgccgtgaaagctttcggccagttccgcggcgccctggtagcgatcgagccgaaaagc
ggcgaagtgctggccttcgtcagccagccaggcttcgaccccaacctgttcgtcgacggc
atcgacgccgccaactgggacgcctataacaattcgcccgacaaaccgctcaacaaccgc
gccctgcgcggccagtacccgcccggctccaccttcaaaccgttcatggcgctggccggg
ctggagctaggcaaacgcacgccttcctacaccatctccgaccccggtttctacaccctg
cccggcagcagccaccgttaccgcgactggaaagtcggcggccacggctcggtggacctg
cgcaaatccatcgtcatctcgtgcgacacctactattacggcctggcggtagacctgggc
atcgacaacatcaccaacttcatgagccacttcggcttcggcaggaaatccggcatcgac
atcgaaggcgaacaatccggggtgctgccgtcgcaagcgtggaaaatgaagcgcttcagg
cagaagtggtacaccggcgacaccgtcagcgtcggcatcggccagggctacaacctcgcc
acaccgctgcaactggcggtggcgaccgccgcactggccaataacggccaggtcatgcgg
ccgcacctggtgcacagtgtccaggacagcaaaaccggccagatccgcgtcctggcgccg
gaagcccgcgacacctggccgctcaagccggaaaatctggacctggtgaaagccgcgatg
gtggatgtcacactccccggcggtaccgcctcacgcgccggcgcgggggcggaatacagc
atcgctggcaagaccggtaccgcccaggtggtcgccatcaaacagggacaaaaatacatc
gaaagccaggtcgcggagcgcaaccgcgatcatgccctgttcatcgcctttgcccccgcc
gacaagccaagaatcgccgtcgccgtgctggtggaaaacggcggccatggcggcagcacc
gcggcaccgatcgcgcgcatggtgatggactattacctgctgggcaaagtccccaaagaa
cagctcgcacccgacgcggcagaggagccggaacatgattag
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