Silene latifolia (white campion): 141596288
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Entry
141596288 CDS
T11116
Name
(RefSeq) protein transport protein SEC23 E-like
KO
K14006
protein transport protein SEC23
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141596288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141596288
Membrane trafficking [BR:
slaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
141596288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
DUF3921
Motif
Other DBs
NCBI-GeneID:
141596288
NCBI-ProteinID:
XP_074272499
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Position
8:complement(8855607..8864004)
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AA seq
772 aa
AA seq
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MATQADMSAEGIDGVRMTWNNWPKSKVEASKCVIPIAASISPIRPHPDLITLPYAPLRCK
TCVAALNPYCRVDYTAKIWICPLCFQRNHFPPHYASAISESNIPGELYPNYTTIDYKQET
GVGTGVGGGDRVVVFVVDTCMIEEEMEYVKSAVRRAVVGEMEGVRVGFVSYGTQVHVHEL
GFSDVMNKVYIFRGDREIGKDVVLDQLGISRKAGFSKVGGGVGGVGGGGGGGSGVDRFLL
PAADCEYTLNALLDELETDQWPVPPGSRSLRCTGAALNVAVGLLSACTPGTSARIIALVG
GPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYFQKAVKFYDSLGKQLVSQGHVLDLFASA
LDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRLFDEGEQSLSLCTNGTLEIYCSK
DIKIQGIIGPCTSLEKKGVSVADTVIGQGNTMAWKLCSLDKNTNLTVYFDISSSERSNTP
GTLNPQLYLQFLTSYQNSQGQMMLRVTTVSRNWVESSVGSEELAQGFDQETAAVVMGRLC
SHKMEMEEGFDATRWLDRNLIRLCSKFGEYRKDDPTSFSLNQCFSLFPQFMFNLRRSQFV
QVFNNSPDETAYFRMLLNRENITNAAVMIQPSLISYSFNSPPSPALLDVASIGADRILLL
DSYFSVVIFHGMTIAQWRNMGYQNQPEHEAFKLLLEAPHQEAQMIVHDRFPVPRLVVCDQ
HGSQARFLLAKLNPSSTYNNVNEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaagcagatatgtccgccgaaggaatcgacggagttcgaatgacctggaac
aattggccgaaatcgaaggtagaagcatcgaaatgcgtgatcccgattgcggcatcaatt
tctccgatccgaccgcatccggacctgattaccttaccgtatgctccgttacggtgtaag
acttgcgttgcggcgttgaatccgtattgtagggttgattatacggcgaagatctggatc
tgtccgttatgttttcaacggaatcattttccgccgcattatgcgtcggcgattagtgaa
tcgaatattccgggtgaattatatccgaattatacaacaattgattataaacaagaaacc
ggagtcggaaccggagtcggaggaggagatagagtggtggtgtttgttgtggatacgtgt
atgattgaggaagagatggagtatgtgaaatcggcggtgaggagagcggttgttggtgaa
atggaaggggttcgggtcgggtttgtgtcgtatgggactcaagttcatgttcatgagtta
gggtttagtgatgtgatgaataaagtttatatttttagaggtgatagggaaattggtaag
gatgttgtgttggatcagcttgggattagtcgaaaagccgggttttcgaaggttggtggt
ggtgttggtggtgttggcggcggcggtggtggtggtagtggtgttgatcggtttttattg
ccggctgctgattgcgagtatacgcttaatgcgttattggacgagttggagactgatcag
tggcctgttccacctggtagtagatcactacggtgcacaggggccgctttaaatgtggca
gttgggttactttcagcctgtactccgggaaccagtgctcgtataattgctctggtgggt
ggaccttgtacagaaggaccaggaacgattgtgtcaaaagatctttcagatcccgtacgt
tcacacaaggatctcgataaagacgcggcgccttattttcaaaaggcggtgaagttttat
gatagtctcggaaagcaattagttagccagggtcatgtactggaccttttcgcctctgca
ctcgatcaggtcggagttgcagagatgaaggttgctgtggaaagaactggcggtcttgtt
gtgctgtctgagagtttcggtcattcagtatttaaagattccttcaaacgtctttttgat
gagggggaacagtctcttagcttgtgcaccaatggcacactagagatatattgttcgaag
gatataaaaattcaagggattattggaccatgtacttctttggaaaagaaaggagtttct
gtagcagatacagtcattggacagggaaacactatggcgtggaagttgtgcagtcttgat
aaaaacactaatttgactgtgtacttcgatatttcttctagcgaacgttcaaatactcca
ggaactttgaatccacaattgtacttgcagttcttgaccagctatcagaattcccaaggt
caaatgatgcttcgggttacaacagtcagcagaaattgggtagagagtagtgttggttca
gaggaacttgcacaaggttttgatcaagaaactgcagctgttgtaatgggtagactatgc
tctcataaaatggaaatggaggaaggatttgatgcaactcgatggttggatcggaatctg
atacgtctttgttcaaagtttggtgaatatcggaaagatgatccaacttcatttagccta
aaccagtgcttttctttatttccccagttcatgtttaatttaagacggtcacagtttgtt
caggtgttcaacaacagtcctgatgaaacggcctatttccgcatgttgttgaatcgtgaa
aacatcactaatgcagccgtgatgattcagccatcccttatatcatattcattcaattct
ccgccatctccagcgttgttggacgtggcatccattggagctgatcgcatattattgctt
gattcttattttagtgtagttatcttccatggtatgactattgctcaatggcgtaacatg
ggctaccagaatcagcctgaacatgaggcctttaaactattattagaagctccacatcaa
gaagctcaaatgattgtccacgatcgtttcccagtgccaagattagttgtttgtgatcag
catggatctcaggctagatttcttttggcaaagttgaatccatcgtcgacatacaacaat
gtaaatgaaatggcagctggatccgacgtgattttcaccgatgatgttagcctacaagtg
ttctttgagcatcttcagagactggctgtacaatcttga
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