Silene latifolia (white campion): 141597093
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Entry
141597093 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141597093
KO
K12869
crooked neck
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141597093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141597093
03036 Chromosome and associated proteins [BR:
slaf03036
]
141597093
Spliceosome [BR:
slaf03041
]
Complex B
Other components
Prp19-related factors
141597093
Complex C
141597093
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
141597093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
TPR_8
HAT_Syf1_M
TPR_17
Motif
Other DBs
NCBI-GeneID:
141597093
NCBI-ProteinID:
XP_074273543
LinkDB
All DBs
Position
8:complement(97523375..97529450)
Genome browser
AA seq
704 aa
AA seq
DB search
MGSYKESDPELGYLTKRDTEVKLPRATRVKNKTPASIQITAEQILREARERQEAEIRPPK
QKITDSTELADYRLRKRKEYEDLIRRVRWNTGVWVKYAKWEESQMDFERARSVWERALDV
DYRNHTLWLKYAEMEMKNKNVNHARNVWDRAVSYLPRIDQLWYKYIHMEEMLGNVAGARQ
VFERWMQWQPDQQGWLSFIKFELRYNEIDRAQGIYERFVQCHPKVGSWIRFAKFEMKNGD
IARARNCYERAVDILADDEEAELLFVAFAEFEEKCKETDRARCIYKFALDHIPKGRAEEV
YKKFVAFEKQYGDKEGIDDAIVGKRRFQYEDEVRKNPLNYDNWFDYIRLEESVGIKERVR
EVYERAIANVPPAEEKRYWQRYIYLWINYALYEELEAEDMERTREVYRECLKLIPHDKFS
FAKIWLLAAQFEIRQLNLNGARQILGNAIGRAPKDKIFKKYIEIELQLGNIDRCRKLYEK
YLDWSPENCYAWTKYAELERSLCETDRARAIYELAIAQPALDMPELLWKAYIDFEISEGE
YENTRALYERLLDRTKHLKVWISYAKFEATAMEDSGAPDMAEEEIQEMLCEKKKLCAQHA
RRVFERAISHYRVSAPELKEERAMLLEEWLNTEKDFGELGDVASVQAKMPKKLKRRRPLM
TEDGPAGFEEFFDYLFPEETQTTNLRILEAAYKWKKQKVSGDDD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgtacaaggagtcggaccctgaactagggtacctgacaaagagagacactgaa
gtaaaactaccacgggcaacacgggtcaagaacaagacccctgcttccatccaaattacc
gctgaacaaatcttgagggaagcacgtgagcgacaagaggctgaaatccgccctcctaag
caaaagatcactgattccaccgaacttgcggactaccgtctgaggaagcgtaaggagtat
gaggatttgattcgtagggtgaggtggaatacaggggtgtgggttaagtatgccaaatgg
gaggagtcgcagatggactttgagcgtgctcggtctgtttgggagagagcgttggacgtt
gattataggaatcatacattgtggctgaaatatgctgaaatggagatgaagaataagaat
gtgaaccatgctaggaatgtgtgggatcgtgccgtctcgtatttgccaagaatagatcag
ttgtggtataagtacattcatatggaagagatgcttggtaatgtggctggtgctagacaa
gtttttgaaagatggatgcaatggcagcctgatcaacaggggtggctctctttcattaag
tttgagctacgttacaatgagatcgatcgtgcccaaggaatatatgagaggtttgtacag
tgtcacccaaaagttgggtcgtggattcgatttgcaaaattcgaaatgaaaaatggggac
attgcccgagccagaaattgctacgagagagctgtggacatattggctgatgatgaagaa
gccgagctgctgtttgtggcgtttgctgagtttgaggaaaagtgcaaggagacagatcgt
gctcggtgcatctataaatttgcgttggatcatatacctaaaggacgagctgaggaggtt
tataagaagtttgttgcatttgagaagcaatacggggataaagaggggattgatgatgcc
atagttgggaaaaggagatttcaatatgaggacgaggttaggaaaaacccccttaactat
gacaattggtttgattacattcgattagaggaaagtgtgggtatcaaagagagagttagg
gaagtatatgaacgagcgatagcaaatgttcctccggccgaggagaagcgctactggcaa
cgttacatttacttgtggatcaattacgctttgtatgaggaacttgaggctgaggatatg
gaacgaacaagagaagtatacagggaatgtcttaagttaattcctcatgacaaattctcc
tttgcaaagatctggctgttggcagctcaatttgagatacgacaattaaatctcaatggt
gcccgacagatattgggcaatgcgataggaagggctccaaaagataagatattcaagaag
tacattgaaatagagttgcaattgggaaacattgaccggtgcagaaaactttatgaaaaa
tatttagattggtcgccagaaaactgctacgcgtggactaaatatgccgagctagagaga
tctttgtgtgagacggatagggcgagggctatttatgaacttgcgattgcgcagcctgca
ttagatatgccagaattgttgtggaaggcatacattgatttcgagatatctgaaggcgaa
tatgaaaataccagagctctatatgagagacttcttgatcgaacaaagcacttgaaggtg
tggattagctatgctaagtttgaagctactgctatggaagatagtggggccccagacatg
gcagaggaggaaattcaggaaatgctgtgcgagaaaaagaaactgtgtgcacagcatgct
agacgtgtttttgaacgagctatcagtcattacagggtttctgctcctgagttgaaagaa
gagagggcgatgctcttggaagagtggctgaacactgagaaagattttggtgagcttgga
gatgttgcttcagttcaggctaagatgcccaagaaactcaagaggcggcgccctctaatg
acagaggatggtccagcagggtttgaagagttctttgactacctcttcccagaggaaact
cagacaaccaatctgaggattttggaggctgcctataaatggaagaagcagaaagtttct
ggtgacgatgattag
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