Silene latifolia (white campion): 141599280
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Entry
141599280 CDS
T11116
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04145
Phagosome
slaf04517
IgSF CAM signaling
slaf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141599280
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141599280
09142 Cell motility
04814 Motor proteins
141599280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141599280
03036 Chromosome and associated proteins [BR:
slaf03036
]
141599280
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slaf04812
]
141599280
04147 Exosome [BR:
slaf04147
]
141599280
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141599280
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
141599280
Cytoskeleton proteins [BR:
slaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
141599280
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141599280
Exosomal proteins of other body fluids (saliva and urine)
141599280
Exosomal proteins of colorectal cancer cells
141599280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
141599280
NCBI-ProteinID:
XP_074275356
LinkDB
All DBs
Position
9:complement(17959140..17962349)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDTTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQISTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITTSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGAEDDDEGADYED
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatttcaatccacattggtcaagccggtattcaggtcggaaatgcgtgt
tgggagctttactgccttgaacacggaattcaggctgatggtcagatgccaagtgacaca
actgttggaggaggagatgatgctttcaacaccttcttcagtgaaactggtgcagggaag
cacgttcctcgtgctgtctttgttgaccttgagcccactgtcattgatgaggtgaggacc
ggcacttaccgccagctcttccacccagagcagctcatcagtggcaaggaggatgccgcc
aacaactttgctcgtggtcactacaccattggcaaagagatcgttgatctttgcttggac
cgcatccgtaagcttgctgacaactgtactggtcttcaagggttccttgtattcaacgct
gttggtggaggtactggatctggtctcggatccctcctcttggagcgtctatctgtcgac
tatggaaagaaatcgaagttgggttttactatttacccatcaccccagatctcaacctct
gttgttgagccttacaacagtgtcctctcaacccactccctcctggagcacactgatgtt
gctgttctgcttgacaatgaagccatctatgacatctgtaggaggtcccttgacatcgag
cgtcctacttacactaacctgaaccgtctgatttctcaggtcatttcatccctcactgcc
tctctcaggttcgatggtgccctaaatgtggacgtcaatgagttccagaccaaccttgtg
ccatacccaagaattcacttcatgctttcctcatatgcccctgttatttcagctgagaag
gcataccacgagcagctctcagttgccgagatcaccaccagtgccttcgagccatcttcc
atgatggccaagtgcgacccacgtcacggcaagtacatggcttgctgtctgatgtaccgt
ggtgacgtggtccctaaggacgtcaatgctgctgtagccacaatcaagaccaagcgcacc
atccaatttgtcgactggtgcccaaccgggttcaagtgtggtatcaactaccagccccca
agcgtggtacctggtggtgaccttgccaaggttcagagagcagtctgcatgatctccaac
tcgaccagtgttgctgaggtgttctccagaattgaccacaagtttgacctcatgtatgcc
aagagggcttttgttcattggtacgtgggtgagggtatggaggaaggcgagttttctgag
gctcgtgaggacctggctgctcttgagaaggattacgaggaagttggtgctgagggtgca
gaggatgatgatgaaggagctgattacgaggactaa
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