Silene latifolia (white campion): 141600287
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Entry
141600287 CDS
T11116
Name
(RefSeq) protein transport protein SEC24 A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141600287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141600287
Membrane trafficking [BR:
slaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
141600287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
141600287
NCBI-ProteinID:
XP_074276585
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All DBs
Position
9:complement(186588128..186596796)
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AA seq
992 aa
AA seq
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MATGNPGRPAASPFAAAAPPAASPFVASAPVVSRPDGPSVRPPPVSGSAITTPFSSAGPM
AGTSAPPSFRPGPPGGFVRPSTLAPPGPPPSQVPPASNQFQHFSTPQFSVPPQPPLSRPP
PAGLPNMVQPPVQPIMGPPIQRPGVPGPSPPVTFRPPTQTPLGQMVPPPQPFAQGPPVQT
PSYYSSQPGYVQPPPHQGMAGMHGREHMQQPFSAPPAGPMQDLVEDFNSLSLGAVPGSMD
NGLDPKALPRPLEGDVEPKAFAEMYPLNCSPKYLRLTTNCIPNSQSLASRWHLPLGAVVC
PLAEASEEEEVPIVNFGSIGIIRCRRCRTYVNPYVTFTDNGRKWRCNLCALLNEVSGDYF
AQLDATGRRIDADQRPELTKGSVEFVAPTEYMVRPPMPPLYFFLIDVSVSAVRSGMLEVV
AQTIKSSLDKLPGFPRTQIGFITFDSTIHFYNLKSTLTQPQMMVVSDVEDVFVPLPDDLL
VNLSESRNVVESFLDSLPTMFEDTMNVESAFGPALKAAFMVMRQLGGKLLIFQNSLPSIG
VGRLRLRGDDVRVYGTDKEHSLRVAEDPFYKQMAADFSKYQIGVNVYAFSDKYTDIASLG
TLSKYTGGQVYFYPSFKSGIQQDKLRHELGRDLTRETAWEAVMRIRCGKGVRFSTYHGNF
MLRSTDLLALPAVDCDKAFAMQLCLDEALLTTQTVYFQVALLYTASCGERRIRVHTAAAP
VVSDLGEMYRQADTGALVSVLSRLAIEKTLSSKLDDARTYLLKIVVKALKEYRNLHAVQH
RLAGRMIYPESLKCLPLYMLALCKSTPLRGGFADVQLDERCAVGSILMTLPVKSLLKFLY
PSLIRVDEFLLKASSFDLQDVEKSMPHLPLTSQSLDPRGLYIFDDGLRFVIWIGSMLPPE
VARSLNVDYSSDLSQVNLCESGHEISRRLMGVLNKLRESNPAYYQLCHLVRQGEQPREGL
YLLANLIDDQTGGTSGYADWIMQIHRQVQQNA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggaaatccaggtcgtcctgctgctagtccctttgcagcagcagccccccct
gccgcaagcccttttgtagcgtctgctcctgtggtgagtagacctgatggccctagtgtt
agacctcctccagtctctggttccgcaatcacaacccctttctcgtctgctggccccatg
gcgggaacttcagcccctccttcattcaggcctggaccacctggtggttttgtccgtcca
tctacacttgcaccacctgggccaccaccatcacaggtcccacctgcgtcaaaccagttc
caacatttctccactccacaattctctgtgccacctcaacctcctctttcccgtccgcct
ccggctggcttgcctaatatggtgcaaccacctgtacagcccattatgggtccaccaatc
caacgacctggcgtccctggtccaagtccccctgttacttttcggccgccaactcaaaca
ccacttggtcaaatggtaccccctcctcaaccttttgctcagggtccaccagtacagact
ccgtcatattattcatcgcagccaggctacgtgcaacctcctccgcatcagggtatggca
ggtatgcatgggagagaacacatgcaacagcccttctctgctcctcctgcaggccctatg
caagatttggtagaagatttcaactctctgtctctgggcgctgttcctgggtcgatggat
aatgggcttgatcctaaagcattgccgaggccactcgagggggatgtagagccaaaagcc
tttgctgagatgtatcctttgaattgtagcccaaaatacttgcggcttactactaattgt
ataccaaattctcagtcattggcctcaaggtggcatttaccactcggagctgtcgtttgc
cctcttgctgaagcatctgaagaagaggaagtgcctatagtaaattttggttctataggt
atcattcgctgcaggagatgtcgaacatatgtgaatccatatgtcacattcactgataac
ggaagaaagtggcgctgcaacttgtgcgcacttcttaatgaagtttctggtgattatttt
gctcaactggatgccactggcagaagaattgatgcagatcaaagacccgaacttaccaaa
ggtagtgttgaatttgttgcaccaaccgagtatatggtgcgaccacccatgccacctctg
tattttttcctcatcgatgtgtcagtatcagcagtcaggagtggtatgcttgaggttgtg
gctcagactatcaagtcatctctggacaaactacctgggttccctagaactcaaattggt
tttataacatttgatagtacaatacatttctataacctgaagtcaacattgacgcaaccc
cagatgatggtggtgtcagatgtcgaggatgtgttcgtaccattgccagacgatctcctt
gtgaacctttcggaatcaagaaatgttgtcgaatcatttttagatagtctgcctactatg
tttgaagacacgatgaatgtggaatctgctttcggcccagctcttaaagctgctttcatg
gttatgaggcaacttgggggtaaacttttgattttccaaaattcactcccgtcaattgga
gttgggcggttgagactacgtggcgatgatgttcgtgtttatggaactgataaagaacat
tctttgagagtagctgaagatccattctacaagcaaatggcggctgatttttcaaagtat
cagataggagtgaatgtgtatgcatttagcgacaagtacacagatatagcctcattagga
actctttcaaaatacactggggggcaggtttacttctatcccagtttcaagtcaggaatt
caacaagacaagttgaggcatgaattgggcagggacctgacgagggagactgcttgggag
gctgttatgcgcatcagatgtggaaaaggggtcagatttagtacttatcatggcaacttc
atgttgaggtccactgatttgctagcacttccagctgtggactgtgataaggcctttgcc
atgcagttatgcttggatgaggcgttactgacaactcaaactgtatacttccaagttgca
ttgttatatacagcatcatgtggagaaagacgtattagggtacacactgctgctgcacca
gtggtttcagatctaggagagatgtatcgccaagctgacactggagctttagtttcggtg
cttagccgtctagcaattgagaaaactttatccagtaagctggatgatgcacggacctat
ttgctaaagattgttgtcaaggccctaaaagaatatcggaatctccatgctgtacagcat
cgattagctggacggatgatatatccagagtccttgaagtgtctgcctttgtatatgtta
gctctttgtaaatcaacacctcttcgtggaggttttgcggatgttcagctcgatgaacgt
tgtgcagttgggtcaatattgatgacactacctgttaaaagtcttctaaagtttttgtat
cccagcttaattcgtgtggatgagttcctattaaaggcatcttcttttgatcttcaggat
gtcgagaagagcatgcctcatttacccctaacttctcaaagcctggatcctagaggcctt
tatattttcgatgatggtttacgttttgtcatatggattggcagtatgctacctcctgag
gttgctaggagtttgaatgttgactattcttcggatctttcacaggtcaacctttgtgaa
agtggacatgaaatctcgaggaggctaatgggagtgcttaataaactaagagagagtaat
ccagcttactatcaactttgtcatcttgtaagacagggtgagcaacctagagaagggttg
tatcttctagcaaatcttatcgatgaccagacaggaggtacaagtggttatgctgattgg
attatgcaaattcatcggcaggtccagcaaaacgcttag
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