Silene latifolia (white campion): 141606091
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Entry
141606091 CDS
T11116
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03022
Basal transcription factors
slaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141606091
09124 Replication and repair
03420 Nucleotide excision repair
141606091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141606091
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141606091
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
141606091
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
141606091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
141606091
NCBI-ProteinID:
XP_074281188
LinkDB
All DBs
Position
10:complement(142133182..142137793)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATKGLFISCDIPMAQFVINMNASLPHNQKFIIRVLDNTHLFVQPHAAEMIRTAISEY
RDQNTYEKPS
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgccacgaaagggctcttcatttcctgtgatatacctatggcacagtttgtc
attaatatgaatgcttcactaccgcataaccaaaaattcataatccgagttctcgataac
actcacctttttgtgcaacctcatgctgctgagatgatcagaacggccatttctgaatac
agggaccaaaacacttatgagaagccttcttaa
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