KEGG   Silene latifolia (white campion): 141618481
Entry
141618481         CDS       T11116                                 
Name
(RefSeq) splicing factor SF3a60 homolog isoform X1
  KO
K12827  splicing factor 3A subunit 3
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141618481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slaf03041]
    141618481
Spliceosome [BR:slaf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    141618481
 Complex B
    141618481
 Complex C
   U2 SnRNP specific factors
    141618481
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N DUF2175
Other DBs
NCBI-GeneID: 141618481
NCBI-ProteinID: XP_074291696
LinkDB
Position
X:complement(328966139..328975752)
AA seq 509 aa
MSSTLLEVTRSSHEEVERLERLVAKELTNDPTSSKDRLYQSHRVRFMLDQIINTSHKLVE
IYEDKDNARKDEIAALGGHTAFGTNVFSAFYDRLKEIRDYHRRHPAVRAVDADEEYEQMF
KEDPVLDFSGEEGFGRYLDLHEFYNRYINSKFGERMEYIAYLNVFSQPQLIPRKRKMTRQ
YREYITELLEYLIFFFERTEPLQDLDRIFTKVASEFEEQWTSGKVEGWENEGQENRHDFQ
ASTIDLDYYTTVEELVEVGPEKLKEALAALGLKSGGTVQQRAERLFLTKNTPLEKLDKKH
FAKSLRAPEQNGNADVPSRKQEDVKELALMEVKIRKLCELLQENIVRTKENAEKKQGMTY
EELLQELEDEDTQADVESDDENETIYNPLKLPLGWDGKPIPYWLYKLHGLGQEFKCEICG
NHIYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQDAKELWEKIQARQGVHKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgcttctagaagtaacgcgatcatctcacgaagaagtagagagattagag
cgtttagttgctaaagaactcacaaatgatcctacttcttccaaagatcgtctttatcaa
agtcatcgtgttcgctttatgcttgatcaaatcatcaatacttcgcataaacttgttgag
atttatgaagataaagataatgctaggaaggatgaaatcgcggcgctgggtggacatacg
gcttttggtactaatgtgtttagcgccttctatgatagattgaaggagattcgtgattac
cacaggaggcatccagctgtgcgggctgttgacgcagatgaggagtatgagcagatgttt
aaagaggaccctgtccttgatttcagcggggaggaaggatttggtcggtacttggatctt
catgaattttacaatagatacatcaattcaaagtttggtgaacgaatggagtatattgct
tatctgaatgttttctcgcagccacaattgatccctcgcaaacgaaagatgacaaggcag
tatagagagtacataactgagctactggagtatctcatattcttttttgagcggacagag
ccattacaagatcttgatagaatatttaccaaggtagcatctgaatttgaagagcaatgg
acaagtggcaaagtagaaggatgggaaaatgagggccaagagaatcgacatgactttcag
gcttctacaattgatctcgactattatactacagtggaagagctagttgaagtaggccct
gaaaagttgaaagaggccttggctgctctaggactaaaatctggtggtactgttcaacaa
agagcagagaggttatttcttactaagaacacccctctggaaaagctggataagaagcat
tttgccaagtctctacgtgcgccagagcagaatggtaacgcggatgtgccatctaggaag
caagaagatgtcaaggagttggctttgatggaggtgaaaataagaaagctttgtgaactg
ctacaagagaacatagtccgaacaaaagaaaatgctgagaagaaacagggaatgacttat
gaggaactgttacaggagctagaggacgaggatacacaagctgacgttgaaagtgatgat
gaaaacgaaactatatacaatcccttgaagttgccacttggctgggatggcaaaccaata
ccatattggttgtataagcttcatggtcttggacaggaattcaagtgtgaaatttgtgga
aatcatatttactggggccgtagagcttttgagaggcattttaaggaatggcgtcaccag
catggaatgcgttgtcttggtattccaaacacaaagaatttcaatgaaattacttctatt
caggatgcgaaagagctctgggagaaaattcaagcaagacaaggagtgcataagtggcgc
ccagacctcgaggaagaatatgaagatcaggagggtaacatctataacaagaaaacatac
accgatctacaacgccaggggttgatctaa

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