Silene latifolia (white campion): 141633914
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Entry
141633914 CDS
T11116
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141633914
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141633914
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Rap1_C
Motif
Other DBs
NCBI-GeneID:
141633914
NCBI-ProteinID:
XP_074302357
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Position
Y:complement(23220089..23222963)
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AA seq
436 aa
AA seq
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MEKEGFFLLLCSLVLFISTVAENKTWESDTYWQMRAKEAALRNEAAYHPHPFNVTNHIKL
RATKLLQNIGLNNTRRVLARKYRRSCLYTNPIDECWRCNPNWANNRKKLAKCALGFGSGT
TGGILGPRYVVTDSSDNDMVNPKPGTLRHAVTRDGALWIIFSAHMTIRLNQELIISSNKT
IDGRGSNVVIEGGAGFTLQFVENVIVHGLKFRNIVPGNGGLIRDSADHFGFRTRSDGDAI
SIFGSHHIWIDHCSFSKCADGLIDAIQGSTAITISNCHMTNHDKAFLFGARDTDFMDRKM
QITIAYTHFGKGMVQRMPRCRWGFFHVVNNDYTHWEMYAIGGSQNPTIISEGNRFIAPYN
DFAKEVTHRMRPDSPWDSGVWTSKDDVLLNGATFKQSGSLQTTQFADKMVKSTPGRFTGR
MTRFAGPLKCIPNIPC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaggtttctttcttctcttgtgttccttggtattattcatatcaacggta
gcagaaaacaagacatgggaatcagacacatactggcaaatgagagcaaaagaagctgcc
ttgcgcaatgaagctgcgtatcaccctcacccttttaatgtcacaaaccacatcaaactt
cgggctacaaaactcctacaaaatattggattgaacaatacaaggagggttttggctagg
aaatacagacgaagctgcctatacacaaaccctattgacgaatgctggcgatgcaatccc
aattgggcaaacaaccgaaagaagttggccaaatgtgccctcgggtttgggagtgggaca
accgggggaatcctcggtccaaggtatgtagtaaccgactcttcagacaacgacatggta
aaccctaaacctggaaccttacgccatgcagtgactcgtgatggggcactatggatcata
ttttcagcccacatgaccataaggctcaaccaagagctcataattagtagcaacaagaca
attgatggtcggggttcaaatgtggtcatagaaggcggtgctggatttacacttcagttt
gttgagaatgtcatcgtccatggtctcaagtttagaaatatagtcccaggtaatggaggc
ttaattagggattcggctgaccatttcgggtttcggacaaggagtgatggtgatgccata
tcaattttcggatcacatcatatttggatcgaccactgctccttttccaaatgcgctgat
ggtcttattgatgctatccagggctcaactgccatcaccatctctaattgccatatgacc
aaccatgacaaggcttttttatttggggcaagagataccgacttcatggacagaaaaatg
caaataacaatagcatatactcactttgggaagggtatggtgcaaaggatgccaaggtgt
agatggggattctttcacgtagttaacaatgactacactcactgggaaatgtacgccatt
ggtggcagccagaatcctaccattatcagcgagggcaaccgatttatcgcaccatacaat
gactttgctaaggaggttacccacaggatgagaccggactcaccatgggatagcggggta
tggacatcgaaggacgacgtattgctaaatggagcaacatttaaacagtcgggtagtctt
caaactacacaatttgcagataagatggtgaaaagcacacctggtagatttacggggagg
atgacccgctttgctggaccattgaaatgcatacctaacataccttgctaa
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