Silene latifolia (white campion): 141643098
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Entry
141643098 CDS
T11116
Name
(RefSeq) pumilio homolog 1-like
KO
K17943
pumilio RNA-binding family
Organism
slaf Silene latifolia (white campion)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
divDNApol
COG5_C
Motif
Other DBs
NCBI-GeneID:
141643098
NCBI-ProteinID:
XP_074308228
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Position
2:complement(147695686..147703403)
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AA seq
1035 aa
AA seq
DB search
MITEINDINNMTSDVGLRSIDYSEELGRNYDVFRSPSAPPTIDGSLAAIGGIFSGAGEIS
EDELRSDPAYINYYYSNVNLNPRLPPPLLSKEDWRYARRWEGGAHGVGGGLGGIGDRRKV
GNNSNGNNNNSVNNNGGVSNGNGGGVGEGDHGFDNSLFAKQPSFNGGLVENGVDGGGQNE
WSGVGLPGLGLGLGSRQKSIAEIIQNDLNHSTSAPRIPSRPASRNAFDETISVSEAQLAP
QSPSDALRTSGDVQGSSANHNASVSAALSYASALGASLSRSTTPDPQLIARAPSPRIPTA
GEGRVNSMDKRSVHSPIALHGSSNGPSTTSDLVAALSGMSLSVDPHMDEERQLRSQFQRG
DHQNLFNLHGDLGHMKKNTHLNSVDYVPFHQQSVSLPAKGSYSTMGKGGIDQNYFLRSDG
LIDHHMLGGPNSPSNFQSVGSPSSAIPNYSLSGHNINPALNSMMAGQLGSGALPPLFENA
AATAIGVGGMDSRGMGGSLSSRANLMAAAGMQNFSRGGNHSPGSGLQGPQLDPLYLHYLS
SGDYTAAAQLAALGDPSIDGGNSYMNLLALQKAYLGTLLSSPKSDSGRPYLGKSAGMNHG
YYGNPAFGMGTGYGGNHLSNSLLPNSPVGPGSPLRHERNMRFPSTGMRNLAAGMMGNWRS
EAGGFMEQSFGSSLLDEFKSNKTKCFELCEIADHVVEFSADQYGSRFIQQKLETATLEEK
NMVFHEITPQALSLMTDVFGNYVIQKFFEHGTASQIRELAEKLTGHVLTLSLQMYGCRVI
QKAIEVVDLDQQKKMVVELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIITTFYDQIL
TLSTHPYGCRVIQRVLEHCHDPTTQRIVMDEIMQSICMLAQDQYGNYVVQHVLEHGKPHE
RTAIISKLTGKIVQMSQQKFASNVIEKCLAFGDATERSNIVNEMLGSSDDNEPLQVMMKD
QFANYVVQKVLETCDDQQLEVILSRIKNHLTALKKYTYGKHIVARVEKLVAAGERRISLQ
TPGYPAPAPAPAPMA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgattacggagattaacgatattaacaatatgacgtcggatgtagggttacgatcgatc
gattatagtgaggaattagggagaaattatgacgtttttcgaagtccgtccgcgccgccg
acaatcgacggttcactcgccgctatcggcggcatattttctggcgccggcgagatttcc
gaggatgagcttcggtctgatcctgcttacataaattactattattccaacgttaatctg
aaccctaggttacccccgccattgttgtcgaaggaggactggcggtatgcgaggcggtgg
gaaggcggcgcacacggcgtcggcggtgggttgggtgggatcggagataggcgaaaagtg
gggaataatagtaacggtaataataataatagtgttaataataatggcggtgttagtaat
ggaaatggcggtggtgttggggaaggtgatcatgggtttgataactcgttatttgcgaaa
caaccgagttttaacggaggattggtggagaatggtgttgatggaggagggcaaaatgag
tggagtggtgttgggttacctggattagggttagggttaggaagtaggcagaaaagtatt
gctgaaattatccagaatgatttgaatcattcaacctctgcaccgagaattccttctcgc
ccagctagccgcaatgcttttgatgagaccatatctgtttcagaggctcaattagctcct
cagtccccatcagacgctctccgtacttctggagacgtacaaggcagttcagcaaaccac
aatgctagtgtctcagctgctcttagttatgcttctgctctaggtgcttccttgtcgagg
agcacaactcccgaccctcagcttatagctagagcccctagtcctcggataccaacagct
ggcgaaggaagggtcaactccatggacaaaagaagtgtccacagtccaattgcactacat
ggctcttcaaatggtccaagtactacttcagatcttgtcgccgctctgtcgggcatgagc
ctctctgtagacccacacatggacgaggagaggcaactgaggtcacaatttcagcgtggt
gaccatcaaaaccttttcaatttacacggggatcttggccatatgaagaagaatacacac
ttgaattctgtggactatgtgcctttccaccagcagtcagtatcccttccagctaaagga
tcatattcaactatgggaaaaggcggcattgatcagaactactttctgaggtctgatggg
ttaattgatcatcacatgcttggtgggccaaattctccttcaaactttcagagtgttggt
agcccaagctcagctattcccaactacagtttgagtggacacaatattaaccctgcactg
aattcaatgatggctggccaacttggtagtggtgcgttgccacctttatttgaaaatgct
gctgctacagccattggtgttggtggcatggattctagaggtatgggaggtagtttgtct
tcacgagcaaacttaatggctgctgctgggatgcaaaattttagtcgaggaggaaatcac
tctccagggagtggtcttcagggaccgcagttggatcccttgtatcttcactatctatca
tcaggtgattatacggctgctgcccagttggcagctcttggagacccttcaattgatgga
ggcaattcttacatgaatctcctagcactccagaaagcctatcttgggacattgctgtcc
tccccgaaatcagattctggtaggccttaccttggaaaatctgctggaatgaatcatggt
tattatggcaatccagcatttgggatggggacagggtacggtggaaatcatctatcgaat
tcacttcttcctaactctcctgtgggacctggtagtcccttaagacacgagaggaacatg
aggtttccttctactggtatgaggaacttggctgctgggatgatggggaactggcggtct
gaagctggtggcttcatggagcaaagttttggatcttccttactcgatgagttcaaaagc
aataagaccaagtgttttgagctctgtgaaattgctgatcatgttgtcgaattcagtgct
gaccaatatgggagtcgtttcatccagcagaagctcgaaacagccactcttgaggagaag
aatatggtcttccatgaaatcacccctcaagcattgtcactaatgacagatgtgtttggt
aactatgttattcaaaagttttttgagcatggcactgcatcacaaatcagagaattggct
gaaaaactgactgggcatgttctgacacttagccttcagatgtatggctgtcgtgtgatc
cagaaggccattgaagttgttgatctggaccagcagaaaaagatggttgtggaactagat
gggcacataatgcgctgtgtacgtgaccaaaatggaaaccatgtgattcaaaagtgcatt
gagtgcattcctgaagatgctatccaatttatcataacaaccttttacgatcaaattttg
accttgtcaactcatccatatgggtgtcgtgtcattcagagagttctggaacactgccat
gatccaacaacccagcgtatagtgatggatgagatcatgcagtctatttgcatgctggcc
caggaccagtatggaaattatgttgttcagcatgtactagagcacggaaagccacatgaa
cgcacggctataataagcaaattgactgggaagatagtccaaatgagtcagcagaaattt
gcctcaaatgttatagagaagtgccttgcatttggggatgcaacagagcgctctaacatc
gttaatgaaatgcttggatctagtgatgacaatgagccgctccaggtgatgatgaaagac
cagtttgcgaactatgttgtacagaaagtgctggaaacttgcgatgaccagcagcttgag
gttatcctctcacgaataaaaaaccatttgacagcactgaagaagtatacctatggaaag
catattgttgctcgtgtagagaaacttgttgctgctggagagaggagaatcagtttgcag
actcctggatacccagccccggccccggccccggccccaatggcatag
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