KEGG   Silene latifolia (white campion): 141646328
Entry
141646328         CDS       T11116                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141646328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slaf03041]
    141646328
Spliceosome [BR:slaf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    141646328
 Complex B
    141646328
 Complex C
   U2 SnRNP specific factors
    141646328
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C HAUS6_N Cwf_Cwc_15 Importin_rep_6 Nop25
Other DBs
NCBI-GeneID: 141646328
NCBI-ProteinID: XP_074310354
LinkDB
Position
3:complement(138887134..138888439)
AA seq 281 aa
MDRARPLMFLDRIFKDLEEELRGKKRPRPEPEALMVDANTVEELMELGLEKLKEGLDTLG
VKSGGTVRQRAERLLLAKNNKLERRHLKKEEKEKETVLLEAKVKKLCEILSHTLEQTRQH
VQNKQAMTPGERDVDAEDEDDVESDNDKDGDDDDKEIYNPLKLPMGWDGRPIPYWLYKLH
GLRQEFKCEICGDHTYFGRRAFEMHFKGARHQNGMRCLGIPNTKSFHEITSIQEACNLWQ
LVKERQGLLKWRPEVDEEFEDADGNVYDTKTFKDLSRQGLI
NT seq 846 nt   +upstreamnt  +downstreamnt
atggaccgtgctcggcctttaatgttcttggacaggatattcaaggatttggaggaggaa
ttgaggggtaaaaagaggcctagacccgaacctgaggcattgatggtcgatgctaacacg
gtggaggaattgatggagttaggattggaaaaactcaaggagggtttggatacccttggc
gttaagtccggaggtacggtcaggcaaagagctgaaagactcctactagccaagaacaat
aaattggaaagacgacatttgaagaaggaggagaaggagaaggagacggttttgttggaa
gcgaaagtgaaaaagttgtgtgagatactaagccatacgcttgagcaaactagacaacac
gtgcagaacaagcaagccatgactccaggtgagcgagatgttgatgctgaagatgaggat
gatgttgaaagtgataatgacaaggatggcgatgatgatgataaggagatatataatccg
ctgaagttgccgatgggatgggatgggagacctataccttattggctgtataagctacat
ggtcttagacaagagtttaagtgcgagatttgtggggaccacacttactttgggcgcagg
gctttcgagatgcacttcaaaggagcacgacaccagaatgggatgcgttgccttggaatc
cctaataccaaaagcttccatgagattaccagcatacaagaggcttgtaatctatggcaa
cttgttaaggagaggcaggggttgttgaaatggcgccctgaggtggacgaggaatttgaa
gacgctgatggtaatgtctatgataccaagacttttaaagacctttccagacaaggcttg
atctga

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