KEGG   Silene latifolia (white campion): 141648047
Entry
141648047         CDS       T11116                                 
Name
(RefSeq) putative splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141648047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slaf03041]
    141648047
Spliceosome [BR:slaf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    141648047
 Complex B
    141648047
 Complex C
   U2 SnRNP specific factors
    141648047
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 141648047
NCBI-ProteinID: XP_074312588
LinkDB
Position
3:complement(130984919..131061814)
AA seq 797 aa
MLGVTPILPLPAPPTDGDLGPLPPSQLPAEDDKQNYYQNEVVKPSSVATHTRRIGIIHPP
PDIRNIIDKTSQFVAKNGPEFEKRIVASNAGNVKFNFLIASDPYHAYYQHKLSEFRAQNQ
NSAQQPSSQPLDSAVPETASADGVAATEEKPDPAAQFRPVRKVLEPPEAEQYTVRLPEGI
TAEELDIIKLTSQFVARNGKSFLTGLTSREMNNQQFHFLKPTHSMFMSFTAFADAYSKVL
MPPKGLTDKILKSVVDRTTVLERCLHRLEWEKTQEQARQKAENEVEQERLQMAMIDWHDF
VVVESIDFADDEDEILPMPMTLEEVIRRSKISTIDEEEVVEPGKEVEMEMDEEEIQLVQE
GMKAASLSENGDDQKNEVASMDEDERPMRIVKNWKRPEERIQLERESSNFVVSPITGELI
PTSEMSEHIRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEE
EVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQAMSQSMGGEDPYEINNNDGRPLPG
PAALPPPRPGVPLVRPLPPPPNLALNMPRLPTSSIQYSTPNSTPNMVPFQHRPMVSANQM
VRPPPPPMQMPLGQQHMMMNRPPMQPLSMPGPPPPAAQFTPVGAHRPFSIMPAHGMPAPP
PPLPQGIPPPPPPPTEAPPPLPDEPEPKRQKFDDTALVPEDQFLAQHPGPVRINVSVPSV
DEGNLKGQILEISMQSLSETVGSLKEKISAEIQLPANKQKLSGKAGFLKDNLTLAYYNVG
NGESLTLSLRERGGRKR
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgctgggcgtgacgccaattttgccacttcctgctccaccaacggatggggatcttggg
ccattaccaccttcccaattgcctgcggaggacgacaagcaaaattactaccaaaatgaa
gtagttaaaccaagctcagtggcaacacatacacgaagaattgggataatccatccacct
ccagatattaggaacattattgataagacatcacagtttgtagctaaaaatgggcctgaa
ttcgaaaagagaattgttgctagtaatgcaggaaatgtgaaatttaactttttaattgca
tcggatccttaccatgcttattatcagcataagctatcagagtttcgtgctcaaaatcaa
aattctgcacaacagccttcttcacagccgttggattctgctgttccagagactgcttct
gctgatggtgttgctgccactgaagaaaaacccgaccccgctgcacaatttagacctgtc
cgtaaggtccttgagcctcccgaggctgaacaatacactgtaaggctgcctgaggggata
acagcggaggaattggatataattaagcttacgtcacaatttgtagccaggaatggaaag
tcttttttgactggtctcactagtcgggagatgaacaaccaacaatttcattttttgaag
ccaacccatagcatgtttatgtccttcactgcctttgcagatgcttattctaaggttttg
atgcctccaaagggtttgacagataagatactgaagagtgttgttgaccgaacgactgtg
ttagagcggtgtctgcatagacttgaatgggagaaaacacaggagcaagctaggcagaaa
gcagagaatgaggtcgagcaagaaagacttcaaatggctatgattgattggcatgatttt
gtagttgttgagagtatagattttgcagacgatgaggacgagatattgcctatgcccatg
actcttgaagaagtcataaggaggagcaagatatctactatagatgaggaagaagttgtc
gagcctggcaaggaggtggagatggaaatggatgaggaggaaatacaacttgtccaggag
ggtatgaaagcagcaagcctgagtgagaatggagatgaccagaagaatgaagtagcttct
atggatgaagacgaacgtccaatgagaatcgtgaaaaactggaaaagaccagaagagaga
attcaattagagagagaatcgtctaactttgtcgtgtctccaattacgggagaattgata
cccacaagtgagatgtcagaacacattaggatctctctcattgatccaaaatacaaggag
cagaaggaacggatgtttgctaagattcgggagaccacacttgctcaagatgacgaaatt
tccagaaatatcgtgggacttgcacgtacgcgtccggacatctttggtaccaccgaggaa
gaagtgtccaatgccgtcaaagccgagattgagaagaaaaaagatgagcagcctaagcaa
gtcatatgggatggacacactgggagcattggccgtaccgcaaaccaggctatgtctcag
agtatgggtggtgaagatccatatgagatcaataataatgatggaaggcctctcccagga
cccgctgctcttcctcctccaagacctggtgttccattagtccgtccactccccccaccg
cctaatttagcccttaatatgccccgtttaccaaccagcagcattcaatattctactcca
aacagtactccgaatatggtaccttttcaacaccgtccaatggtctctgcaaatcaaatg
gttaggccgccacctcctcctatgcaaatgcctcttggacagcaacacatgatgatgaat
cgcccaccaatgcaacctctttccatgccagggccacctccacccgctgcccagtttacg
ccggttggtgctcatcgtcccttttcaatcatgccagcacatgggatgcctgcccctccg
ccaccgttgccacaaggaatacctccacctccgccaccacccactgaagctcctcctccg
cttcctgatgaaccagagccaaaaaggcagaagtttgatgacactgctctggttccagag
gatcagtttcttgcgcaacatccgggccctgttaggatcaatgtatctgttcctagtgtt
gatgaagggaacctcaaggggcaaatactggagatttccatgcagtcgttatctgaaact
gttggcagtctgaaagaaaagatatctgcagaaatccaacttcctgcaaacaagcagaaa
ctaagcggaaaggctggatttctcaaggacaatctcacacttgcttattataatgtcgga
aatggcgagtcgctgacactatcattaagggagcgtggtggccggaaaagatag

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