Silene latifolia (white campion): 141653203
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Entry
141653203 CDS
T11116
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141653203
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141653203
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141653203
NCBI-ProteinID:
XP_074316987
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Position
4:20749774..20756949
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AA seq
326 aa
AA seq
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MGFGHKTSGGADGKIYVVTDKSDNDVVNPKPGTLRYGVIQAEPLWIVFARAMTIKLSQEL
IIASHKTIDGRGCHVHIVGGAGLTLQYVENVILHNLHIHDIKPSSGGMVRDSVKHYGFRT
RSAGDGISLFGATNIWIDHMSMSNCADGLIDAIEMSTAITISNCHFTDHNDVMLFGASNT
RSEDKIQQITVAFNHFGKRLIQRMPRCRWGFFHVVNNDYTHWEMYAIGGSQQPTIISQGN
RFVAPPNRNAKEVTKRDNAPESVWKNWLWTSEDDVFVDGAYFRTSGSGNHIPVLSQEAII
TAKPGTFAREMTRFSGALKCIKGKAC
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcggtcacaagacttcaggaggggcagatggtaaaatatacgtggtgacagac
aagtcagacaatgatgtggtgaaccctaagccagggaccctacgctacggtgtcatccag
gctgaaccattgtggatcgtctttgctcgtgcaatgacgattaagcttagtcaagagctc
ataattgcgagccataagaccattgatggccgtgggtgccatgtacacattgttggcggg
gctgggttaaccttacaatatgtagagaatgtaattctacataatttacatatacatgac
attaagccatcgagtggaggaatggtaagggactctgttaaacattatgggttcaggaca
cgtagtgctggtgatggaatctcattgtttggagccacaaatatttggattgatcatatg
tccatgtctaattgtgcggatgggttgattgatgctattgagatgtctacggctatcact
atctcaaattgtcatttcactgaccacaatgatgtaatgttatttggagcaagtaacact
agatcagaagacaaaatccagcaaataacagttgccttcaaccacttcggtaagcgcttg
attcaaaggatgccaaggtgcagatggggattctttcacgtggttaacaacgattacact
cactgggaaatgtatgccatcggaggcagtcaacaacccactatcattagtcaagggaat
cgattcgtcgctcctcctaatcgaaatgctaaagaggtgacgaagagggataatgcaccc
gaaagtgtgtggaaaaattggttgtggacatcggaagatgatgtatttgtagacggagct
tacttcagaacttctggaagtggtaatcatatacccgtgttaagtcaggaagctataatc
actgcaaagcccggaacgtttgctagagagatgacacgattctcaggcgccctgaaatgt
ataaaaggcaaagcgtgttaa
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