Silene latifolia (white campion): 141653270
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Entry
141653270 CDS
T11116
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141653270
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP100
141653270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
bpMoxR
AAA_18
nSTAND3
AAA_14
AAA_7
ATPase_2
IstB_IS21
AAA_28
TsaE
NACHT
RNA_helicase
DUF815
TniB
RuvB_N
Mg_chelatase
Zeta_toxin
ABC_tran
DUF87
T2SSE
AAA_19
NBD_SMAX1
DNA_pol3_delta2
ResIII
DUF2987
Motif
Other DBs
NCBI-GeneID:
141653270
NCBI-ProteinID:
XP_074317085
LinkDB
All DBs
Position
4:complement(23895019..23900069)
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AA seq
914 aa
AA seq
DB search
MNPEKYTQRTREVIGEAQTLALSNGHAQITPLHVACVLIGESNGVFHQAVSQAGDGDDSA
RLVERVLSRALKNLPSQNPPPDIAQTSTSLIRALRWAQVLQNNSGDTHLAVDHLILGIIE
DSQVGDLFKEAGVALDRVKTEVGKARGKDGRKAASVSGATTNFKALKTYGCDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVSGDVPSNLADVRL
ISLDMGALVAGTKYRGEFEERLKFVLKEVEEAQGKVILFIDEIHLVLGAGRAGGSMDAAN
LFKPMLARGQLRCVGATTLDEYRKYVEKDAAFERRFLQVYVAEPSVPDTITILRGLKEKY
EGHHGVRIQDRALVVAAQLSARYITGRQLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRMQLEIELHALEKEKDKASKARLVEVRKEVDDLRDKLRPLMMKYRKEKERVDELRRLKK
RREELLVALAEAERRYDLARAADLRYGGIHEVESAIAKFEASTTVVEMLTETVGPDQIAE
IVSRWTGIPVTRLGENEKQKLIGLAERLHERVVGQDNAVAAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMERHSVSRLIGAPPGYVGHDE
GGQLTEAVRRRPYSVILFDEVEKAHTAVFNTLLQVLDDGRLTDGQGRTVDFRNTVVIMTS
NLGAEHLLSGLMGKTSMEAAHERVMTQVKKHFKPELLNRLDEIVVFDPLSHEQLRKVARL
QMKDVAKRLAERGVALAVTDAALDYVLAESYDPVYGARPIRRWLERKVVTELSKMLVKEE
IDENSTVYIDSGMDGLTYRVDRNGGMVDLATGQKADVLIQVPNGSKADGNPVTQAAKKLK
IEAIDIEDDEDMVE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaaaaatatacccagaggacaagggaggttatcggcgaggctcaaactttg
gcattgagcaatggacacgcacaaatcacacctctgcatgttgcatgtgtgttgatcggc
gaatctaatggtgtcttccaccaggcggtatctcaggcaggcgatggtgatgattcagca
aggttggttgaaagggtattgagtagggccctcaagaacctaccttcccaaaaccctcct
cccgacattgcccagactagtacttctcttattagggcccttcgttgggcccaagttctt
caaaacaatagtggtgatacccacttggcggttgatcatcttatcctgggaattatcgag
gattctcaggtgggagacttgtttaaggaggctggtgttgctctagatcgggtgaagact
gaggtggggaaggcacgagggaaggacgggaggaaagcggcaagtgtttcaggagctact
actaatttcaaagctcttaagacttatgggtgcgatctagttgagcaggctggaaagcta
gacccggtaattggccgtgatgaggagatccgaagggtggttaggatactgtctagacga
accaagaacaaccctgtgttgatcggggagccgggtgtaggtaagactgctgtggttgaa
ggcttggctcaaagaattgttagtggtgatgttccgagtaatttggccgatgtgaggctt
atttctttggatatgggggctctggtggctggaactaagtataggggtgaatttgaggag
aggttgaaattcgtgctaaaagaggtggaagaagctcaaggaaaggtgatcttgttcatt
gatgaaatccatttggttctcggtgctggtcgggctggaggttcaatggatgctgctaac
ctgttcaagcccatgctagctagaggccagcttcgttgtgttggtgcaaccaccctagat
gagtataggaagtatgtggagaaagatgctgctttcgagaggaggttcctgcaggtctat
gtcgctgagcctagtgttcccgacaccattaccatccttcgtgggcttaaggagaagtat
gaggggcaccatggtgttcgaatccaagatcgggctttggtggttgccgcgcaattgtct
gctcggtatatcacggggcgtcagttgcccgataaagctattgatttggtagacgaggcc
tgtgcaaatgtgcgtgttcaacttgatagtcagcctgaggagatagataatctggagagg
aagagaatgcagttagaaatcgagcttcacgctctcgagaaagagaaggacaaggcgagc
aaggcacgacttgttgaggtcaggaaagaggtagacgatttgcgggataaacttcggcct
ttaatgatgaaatatagaaaagagaaggagagagttgacgaactccggagactcaagaaa
aggagggaagagctccttgtagcattagcagaggctgaaaggaggtatgatcttgctcga
gctgctgacctgaggtatggtgggattcacgaggttgagtcggctattgcgaagtttgaa
gctagtactactgtcgttgaaatgttgactgagactgtgggtcctgaccaaattgctgag
attgtcagtcggtggactgggataccggtcactcgactgggtgaaaatgaaaaacaaaag
ctaattgggctggctgagaggctgcacgaaagagtggtgggccaggataacgcagttgcg
gctgttgcagaggctgtactgaggtcaagggctggactaggaaggcctcaacaacccact
ggctcattcttgtttctgggtcccaccggtgttggcaaaactgaacttgccaaggccctt
gctgaacaactgtttgacgacgagaatctgttggtgagaatcgacatgtccgagtatatg
gagcgacactctgtgtcccggctgatcggtgctcctcctgggtatgtgggtcatgatgaa
ggcggtcagctcactgaagccgtgagaaggcggccttatagtgttatcttgtttgatgag
gtggagaaagctcacactgcagtgttcaacactcttctgcaagttcttgatgatggaaga
ctgactgatggtcaaggccggactgtcgattttaggaacactgtggttatcatgacttct
aaccttggagctgaacacctcttgtctggattaatgggcaagacttctatggaagctgct
catgagagagtcatgactcaggtgaaaaaacactttaaacctgagcttctgaaccgtctg
gacgagattgttgtgtttgatcctctctctcatgagcaactgagaaaggtagctaggctg
caaatgaaagatgtggctaaacgtcttgccgagaggggcgttgccttggctgttacagat
gctgctcttgattatgttttagccgagagttatgaccctgtgtatggagcaaggccgatc
aggaggtggctagaaagaaaggtggtgaccgaactctcgaaaatgcttgtgaaggaagag
atcgacgagaactcgacagtgtacatcgactcaggaatggatggtctgacataccgtgtg
gaccgaaatggaggtatggtggatctcgccacaggccagaaagctgatgtcctgatccaa
gttcctaatggatcaaaggcggatggcaacccagttactcaagccgccaagaagttgaaa
attgaggcaattgatatcgaggatgatgaagatatggtcgagtga
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