Silene latifolia (white campion): 141655895
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Entry
141655895 CDS
T11116
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
141655895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141655895
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141655895
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
ACT_7
DUF2457
Motif
Other DBs
NCBI-GeneID:
141655895
NCBI-ProteinID:
XP_074319003
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Position
5:11333276..11336904
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AA seq
344 aa
AA seq
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MSESMSSFFEGLEFVDPSFSNPPASPDNLFSIFDALEGLQEGEETIKEGVLFQGLSETEL
DALEVEVDQQSKRKRAKLIHVEDDDNQEMRSVGGGGDGGEGSKMSHIAVERNRRKQMNEH
ISVLRSLMPCFYVKRGDQASIIGGVVDYISELQQVLQSLEAKKQRKAYSEVLSPRLISSP
RPSQVLSPRKPPLSPRLNNLPLSPRTPQPSSPYNIRPRTNLSSTLITPIDLSPSSSCSSL
NDFLANELVANSKSPVAEVEVKFSGPNLLLKTVSPKIPGQVVKIVSLLEDLSLEILQISM
STFDGTMLNSFTIKIGIECQLSAEELAHQIQQTFYSSPCSFTSP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaagcatgtcaagtttctttgaaggcctagaatttgtagatccaagtttctcc
aaccctccggcttcaccggataacctatttagcatctttgatgctttagaaggtttgcaa
gaaggtgaagagacgataaaggaaggtgtattgtttcaaggactgtctgagaccgagctc
gatgcacttgaagttgaagtagatcaacagtctaagagaaagagagcaaagttaatacat
gtagaagatgatgataatcaagaaatgaggtcggttggaggtggcggagatggaggagaa
ggaagtaagatgtctcacatagccgtagaaaggaaccgtaggaagcaaatgaatgaacat
atttccgttttgcggtctctcatgccttgcttctatgttaagagaggagatcaagcatca
ataattggtggagttgtggattacataagtgaattgcaacaagttcttcaatcacttgaa
gcaaagaaacaaagaaaagcatatagtgaagtccttagtccaagattaatttcaagtcct
agaccatcacaagtactaagccctagaaaacctcccttaagtccaaggcttaataacctt
cccttaagcccaaggacacctcaacctagtagcccttacaatataagaccaaggactaac
ctctcatctacactaatcactcctatagacttatctccttcatcttcatgctcttcactt
aatgattttcttgctaatgagcttgttgccaactcgaaatctccggtggccgaagttgag
gtcaagttttctggaccaaatctccttcttaagacggtttctccaaaaattccaggacaa
gttgtgaagattgtatcgcttcttgaagatctttcccttgagattcttcaaatcagcatg
agcacttttgacggcacgatgctcaattctttcaccatcaagattggaattgaatgccag
ttaagtgctgaagaactcgcgcaccaaatacaacagacattctactcatctccttgttca
tttacatctccttaa
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