Silene latifolia (white campion): 141656486
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Entry
141656486 CDS
T11116
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141656486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141656486
Ubiquitin system [BR:
slaf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
141656486
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
141656486
NCBI-ProteinID:
XP_074319496
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All DBs
Position
5:4834642..4836428
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AA seq
305 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGC
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgttaagactcttaccggaaagaccatcactctcgaagtcgagagctcc
gacacaatcgacaatgtcaaaaccaaaatccaagacaaggaagggattcccccagaccag
caacgtttgatcttcgctggtaaacaactcgaagacggccgaaccctcgccgactacaat
atccagaaggagtccaccctccacttggtcctccgtctccgtggtggtatgcaaatcttc
gtcaagaccctaactggaaagaccatcaccctcgaggtcgaaagttccgacaccattgac
aatgtcaagactaaaatccaggacaaggaaggaattcccccagaccagcagagattgatc
ttcgctggaaagcagctagaagacggtcgcactcttgcagactacaatatccagaaggag
tctaccttgcatttggttctccgtctgcgtggtggtatgcagattttcgtcaagacgttg
acaggaaagactattacccttgaggtcgagagttcggacacaattgacaatgtcaagacg
aagatccaggataaggaaggaattcccccagaccagcagagattgatcttcgcaggaaag
cagctagaggacggtcgaaccctcgctgattacaacattcagaaggagtcgacactccac
ctggtgttgcgtctcaggggtgggatgcagatcttcgtcaagacattgactggcaagacc
atcaccttggaggtggagagcagcgacacgattgacaatgtgaagacaaagattcaggac
aaggagggaatcccaccagatcagcagaggttgatctttgctgggaaacagttggaggat
gggcgcactttggctgattataatattcagaaggaatctaccctccaccttgtcctccgt
cttcgtggcggttgctaa
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