Silene latifolia (white campion): 141656954
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Entry
141656954 CDS
T11116
Name
(RefSeq) chaperone protein ClpB4, mitochondrial-like isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141656954
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP100
141656954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
AAA_7
Zeta_toxin
AAA_18
NBD_SMAX1
TniB
NACHT
Torsin
DUF4107
Motif
Other DBs
NCBI-GeneID:
141656954
NCBI-ProteinID:
XP_074320150
LinkDB
All DBs
Position
5:19128387..19145789
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AA seq
980 aa
AA seq
DB search
MAIARAATATTRRLTRSAYAAFTTTVRSFSSSTTAPSFSSPAVGRTPNGPLYMPNASASV
NGVGLGLWPASSLMSRRFFSAHSATPSSGPINQTEYTEMAFEGIVGAVEAARESKQQIVE
TEHLMKALLEQKDGLARRILTQAGLDNSSVLQAVDDFISKQPKVSDTSGPVLGSNFSSLI
ERARKHKKEMRDDFLSVEHLVLASHSDPRFGGQLFQKFNLTEKDLKDAIQAVRGSQRVTD
QNPEGKYQALEKYGSDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVG
KTAIAEGLAQRIIRGDVPEPLMNRKLISLDMGALLAGAKFRGDFEERLKAVLKEVSASNG
QIILFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALER
RFQQVFCGQPSVEDTVSILRGLRERYELHHGVKISDGALVSAAVLSDRYITERFLPDKAI
DLVDEAAAKLKMEITSKPTELDEVDRAVLKLEMEKLSLKNDTDKASKERLHKLESDLNSF
KEKQKELNDQWESEKVLMNRIRSIKEEIDRVNLEMEAAEREYNLSRAAELKYGTLTTLQR
QLEEAEKNLSEYRESGKSLLREEVTDVDIAEIVSKWTGIPLSNLQQSEREKLVFLEDVLH
KRVIGQDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELGKALASYLFNTEN
ALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVF
NILLQLLDDGRITDAQGRTVSFTNCVVIMTSNIGSHYILETLRDTQNSKDAVYDMMKRQV
IELARQTFRPEFMNRVDEYIVFQPLDSREISRIVELQMERVKGRLKQKKIDLQYTREAVE
LLATLGFDPNYGARPVKRVIQQMVENEVAMGVLRGDFVEEDTIIVDVGTAPSGKDLPPQN
KLVIKKLDNSAVEEALVANN
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgcacgtgccgccacagcaaccaccagacgactcacacgatcagcctacgcc
gccttcactaccaccgtcagatctttctcttcctccaccaccgcaccttctttctcctcc
cccgcggtaggccggacccctaatgggcctttatatatgcccaatgcgtccgcttccgtc
aatggtgttgggctgggcctatggccggcgtcctcgttgatgagccgccggtttttctcc
gctcactccgccactcccagttccggcccgattaaccaaacagaatatactgaaatggca
tttgagggtattgtcggggctgtagaagctgcccgggagagcaaacagcaaattgtagaa
actgaacacctgatgaaggcccttttggagcagaaggatggtttagctcgaagaatctta
acacaggctggacttgacaattcatcagttttgcaagctgtagatgattttatttcaaag
cagcccaaggtaagtgacactagtggacctgtccttggctcaaacttcagctctctaata
gaaagagctcggaagcacaaaaaggaaatgcgagatgattttttgtcagtggagcacttg
gtgttggcatcgcattcagatccaaggtttggcggacagctgttccaaaaattcaacctt
actgagaaggatctcaaggatgccattcaagctgttcgtggaagccagagagtaacagat
cagaacccggaagggaaatatcaagctctggagaagtatggaagtgacctaactgagtta
gctagacgtggtaaacttgatcctgttattgggagagatgatgaaatacgacgttgcatt
caaattttgtcaagaagaaccaagaacaatcctgttattattggcgagcccggagttggc
aaaacagctattgctgaagggttagcacaacgtattattcgtggggatgtccctgagccc
ttgatgaatcgaaagttaatttctttggacatgggcgcgctactggctggggctaaattt
cgtggtgattttgaggaaaggcttaaagctgtacttaaagaagtcagtgcttctaatggg
caaatcattctgtttatagatgagattcatactgttgtgggagcaggagctactggcggt
gcaatggatgctggtaacttgttgaagccaatgcttggtaggggagagctccgttgtata
ggagcaactactttaaatgagtacaggaaatacatagaaaaggatcctgctcttgaacgt
aggtttcagcaagtgttttgtggccagccttctgtggaggacacagtttcaattctccgt
gggttacgtgagcgctatgaactgcatcatggtgttaagatatctgacggtgctcttgtc
tctgctgctgtgctttcagatcgttacataaccgagaggttcttacccgataaagccatt
gatcttgttgatgaagctgctgcaaagttgaagatggagatcacttctaagcctacagag
ctagatgaggttgatagagcagtgttaaagttagagatggagaaactctctctgaaaaac
gacactgacaaagcatctaaagagcggctccacaagttggaaagtgatctaaattcgttc
aaggagaaacagaaagagctgaatgaccaatgggaaagtgagaaggttctcatgaatcgg
attcgatccatcaaagaagagattgacagagtcaatcttgaaatggaagctgccgaacgt
gagtataacctcagtcgtgctgccgagctaaaatatggaaccttgacgacccttcaacgc
cagttggaagaagctgaaaagaacctttctgaatatcgtgagtctggtaaatcgttactt
cgagaagaagtaactgatgtagacattgccgaaattgtgagcaagtggactggaataccc
ttatcaaacctacagcagtcagagagagagaaactggtctttttagaagatgtgcttcac
aaaagggttattggacaggacatggctgtcaagtctgtggctgatgccattcgccgttca
cgagccggactgtcggatccgaatcggcccattgcaagcttcatgtttatgggcccaact
ggcgtaggaaagaccgagctcgggaaagctttggctagttacctgtttaatactgaaaat
gctcttgtccgaatagacatgagcgagtacatggagaagcatgcagtttccagactagtt
ggtgcgccacctggctatgttggatatgaggaaggtggacagctcactgaggtggttagg
cgaagaccttactcagtcgtcctatttgatgagattgagaaagctcatcatgatgtgttt
aacatcttgttacaactattggatgatgggcgcataactgatgctcagggaagaaccgtt
agttttaccaattgtgtggtgattatgacctctaatattggttcccactatatcttggaa
acattaagggatacacagaattctaaggatgcagtttatgatatgatgaagaggcaggtt
atagagttggctaggcagacattccgaccagagttcatgaatcgtgttgacgaatacata
gttttccagcctctggattccagggaaatcagcagaattgtcgagttacagatggagaga
gtgaaaggtaggctgaagcaaaagaagattgatctccagtacacaagggaagcggttgaa
ctccttgcaacattagggtttgaccctaactatggggcccggccagtgaagcgggtgata
caacagatggttgagaacgaagttgctatgggagtgttgaggggagatttcgtggaagag
gacactataattgtcgatgtgggaacagcaccctcgggtaaagaccttcctccacaaaac
aagctggtcatcaaaaaacttgacaacagcgctgttgaagaggcactggttgccaataac
tag
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