Silene latifolia (white campion): 141657314
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Entry
141657314 CDS
T11116
Name
(RefSeq) polyubiquitin 4
KO
K08770
ubiquitin C
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141657314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141657314
Ubiquitin system [BR:
slaf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
141657314
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
141657314
NCBI-ProteinID:
XP_074320595
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Position
5:40524918..40526266
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AA seq
385 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTVDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGSVVCC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtaaagacccttacaggcaagaccattactctcgaggtcgagagttct
gatacaatcgacaatgttaaaaccaaaattcaggataaggagggcattcctccagaccag
caaaggctgatctttgcaggcaagcagcttgaggacggccgaacactcgctgattacaac
attcaaaaagagtctactcttcaccttgtacttcgtttaaggggaggcatgcagattttt
gttaaaactctgactggaaagactattactcttgaggtcgaaagctctgacactatcgac
aatgtcaaaaccaagattcaggacaaggagggcattcctcctgatcagcaaaggctgatt
tttgctggaaaacaacttgaggatggccgaaccctcgcagattacaacattcaaaaggag
tccactctccatcttgtccttcgtctgaggggaggaatgcagatctttgtcaagaccctt
actggcaagaccattactcttgaggtcgagagctctgacaccattgacaatgtcaaaact
aagattcaggacaaggagggcatcccaccagaccagcaaaggcttatctttgccggtaag
cagttggaggatggacgtactttggccgactataacatacagaaggagtcaaccctccat
cttgtcctgcgtctgaggggaggtatgcagatttttgtcaaaacgctgaccgggaaaacc
atcacccttgaagttgagagctcagacaccattgataatgtcaaaaccaagattcaggat
aaagaaggtatccccccggaccagcaaaggctgatctttgccggaaagcaacttgaggat
ggccgtaccctggctgactacaacatccagaaagagtccaccctccatttggtgctccgt
ctgagaggcgggatgcagattttcgtgaaaactcttaccgggaagaccatcaccctggaa
gttgagagttcggacactgtcgataatgttaagacgaaaatccaggacaaggaagggatc
cctccagatcagcagaggttgatctttgcagggaagcagttggaggatgggcgcactttg
gctgactataatattcagaaggaatccacgctccaccttgtcctccgccttcgtggtggt
tccgttgtctgttgttag
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