Seriola lalandi dorsalis (Yellowtail amberjack): 111650994
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Entry
111650994 CDS
T06058
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111650994 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111650994 (ttc37)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
111650994 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_11
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
HemY_N
Fis1_TPR_C
TPR_Slam
TPR_15
Loricrin
Motif
Other DBs
NCBI-GeneID:
111650994
NCBI-ProteinID:
XP_023256723
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSGKEVKAALKSAREAIKNKEFKEALKSCKAVLKLEKNNYNAWVFIGLAASELDQPDQSQ
SAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKIELPNVYQKLVELYASSDKKKCYEVIT
KLSDIYQSDKEYLKLAKVWLQLIQLREEDAADKKELLQLWQKMTQLLSECLHEEEQDDET
QQHLITAFENTLVLMVPGEKHEKISADYVKCLSKLPQEEAKMKAACESMLSHYPKQSYPL
EVLCSYYLKTGILNEDTISSFSRLLDLAPNCGLGHLGLGTKALQEGRYKDAIKDLSHGLK
KMGCSTGWYSLAEAQFKVHRYSDSATSCSQGLMMCVSGDKELRVKLLRLNLETLVRIGGE
KSADQALETFSQIPDAEKDPVLVALKGRAYLNKGQIDQALKVSSELVASNPNLAQGLALR
GLVHLAEGQQQLAEQSLLNAATQSPNCAEYYFLLGQLYWDMGEETRKDRNKAHTHLLKAA
KLDPHLGCVFRYLGHYYREVANDHGRARGCYKKAFELDNEDAESGTASVDLSMEQGDMDT
ALATLESVIEKATPGSAKWAWMRRGLYHLKAGENQLAIADLQAALRADPEDWVCWECLGE
AYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDYVP
ALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACTAV
RTVSPNRAQVLVPALLAGLDPNSQSHMLNQVQMLKVGEGCYAHALKLMSEAPSLWYDLGL
NYYHQSSIPCPTEADQNSQSLVLEKAQQCLKKAIMMDSGNHSYWNALGVISMNKGLENYA
LAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQALI
AERVGSYDTMDLFRHTTELNTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAISA
AQVALSKYTERIQSDADAFIMLGYLNEHLQLKRQALQAYQRAVELLQSMSSTEELTFALG
SYGRALCTAGQWEEAVHVYNSTPLQELSDLAGLALAYCRAGLIPESISAYERALAVASTE
KEKAYILTALALLQHRQGSLDSAKSLLFKCSMLKEPIPESLLCLCALGLVHSDATLAAAA
LTELLKQGSASGSVVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSRVV
PQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDSHRNALKTMQRAV
LLCPDDPAAWAGLMGACHTENTSCYLSGSAPCRQGLEKILMAVVSEKVRNVEEIERPLAQ
TLEGWVLQQAVTGLVLAGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLLAKGGTV
LPDSVLEQLNKTVMMNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLASQLGLHSSQV
SSLLRLALLALVPCMAGVPGNDWKDLVLEATTEVLKLGSSPMAQLFQALLQYVTKMAARE
TRRLLERLVYVSSQDFPVTVVQVASWYLLRHLHAKNDQELITVLLQHAKMKRDKRLLEFD
SLLASSSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaaagaagtgaaagcagcactgaaaagtgccagagaggccattaaaaacaaa
gaattcaaagaggctctgaaaagctgcaaggctgttttaaaacttgaaaagaacaactat
aatgcatgggtattcatcggcttggcagccagtgaactcgaccaaccagatcagtcacag
tcagcctacaaaaaggcagtggagctggagcctgagcagctactggcatggcagggctta
gccaatctttatgaaaagaccgatcagtgggatttcaaaattgagctacctaatgtttat
cagaagcttgttgagctgtatgccagctcagataaaaagaaatgttatgaggtgatcaca
aagctgtcagatatctatcagtctgacaaagagtacttaaagttggcaaaggtgtggctg
cagctcattcagctgagggaggaagacgctgcggacaagaaagagttactacagctatgg
caaaagatgacccaactcctctcagagtgccttcatgaggaagagcaggacgatgaaact
caacagcatttaatcacagcatttgagaacaccttggttctcatggtaccaggagagaaa
cacgagaagatctcagctgactatgttaaatgtctttctaaactgccccaagaagaagcc
aaaatgaaagcggcatgtgagtccatgctgtcccactatcccaaacaaagttatcctctt
gaggtcctttgttcttattacctcaaaacaggtatcctgaatgaggatacaatcagcagt
ttctcccggctcctggatctggcccctaactgtgggttaggtcacttaggtctgggcacc
aaagcacttcaggagggaagatataaagatgccattaaggacctttcacatgggctgaag
aaaatgggctgcagtacaggatggtacagtctggctgaggctcagtttaaagtgcacaga
tactcagacagtgctacatcatgctcacaaggtctgatgatgtgtgtttctggagacaag
gagctgagggtcaaactgctcaggctgaacctagagactttagtcagaattggaggagag
aagtctgcagaccaggctttggagaccttttcacagattccagatgcagaaaaagaccca
gttttagtagcccttaaaggacgtgcataccttaacaaaggacagattgatcaagcactt
aaggtgtcatcagagctagtggcttccaacccaaacctggcccagggtttagcactgaga
ggactggtacacctggctgaaggccagcagcagctggcagagcagagtctcctaaacgca
gctacccagagcccaaactgtgcagagtattactttttgctgggacaactctactgggac
atgggagaggagacccgtaaagaccgcaacaaagcccatacacacttgctgaaggctgca
aaattagatccacaccttggctgtgtattccgctaccttgggcattattaccgggaggtt
gcaaatgatcatggccgtgcacgaggctgctataaaaaggcctttgagttggacaatgag
gatgctgagtctggaactgcctcagtggatcttagtatggagcagggggatatggacacc
gccttagcaacacttgagtctgtgatagagaaagccactccaggctcagctaaatgggct
tggatgagacgaggcctctaccacctgaaggctggagagaatcaactggccatagctgat
ctacaggcagctctgagagcagacccggaggactgggtgtgttgggagtgtttaggtgag
gcctacctaaaccgccgaagcttcacagctgctctgaaggcctttggtaaggcccatcaa
cttcagccctcctccatctacagtgtttaccaggctgctgcaatcaaacagaccctgggc
aagttcaaagaggcagttgcagagtacttgcagatcaccgcacagcaggactacgttcct
gctctcaaaggtcttggagagtgccagctgtctctggcgaaaagtttaatggaggactgc
agagatggaggagccattgacctcattcagcaagccatacagaacctcttcagagctgtg
gagctgcgtcctgacctgtcctgcttgtggaagctgctgggagatgcatgcaccgcagtc
agaactgtgtcaccaaacagagcacaggttctagtacctgcactgctggctggtttagac
ccaaactcacagagccacatgctgaaccaggtccagatgctcaaagtcggcgaggggtgc
tatgctcatgctttaaagctgatgtctgaggcccccagcctttggtatgacctaggactc
aattattaccaccagtccagcataccctgccctacagaagctgaccagaactcccaatct
cttgtccttgagaaggctcagcagtgtttgaaaaaggccatcatgatggacagtgggaac
cacagctactggaatgcccttggagtgatttccatgaacaaaggtcttgagaactatgct
ctggctcaacattgcttcatcaagtccatacaagttgagccaaataatgttgttgcctgg
acaaaccttggtaccctgtatttgaagaaggacaatatagagcttgcacacgaggccttc
aagattgcccagtccttggagccactgtatgtgaactgctggatcggacaggctctgata
gcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaactcaat
actcacatggagggagtgaaaggttatgcctactgggtatgttcgaccctgctggataag
agcaacagagactctgaactgtatcgctacaacatagtccaaatgaatgccatctctgct
gctcaggtggcactcagcaagtacaccgagaggatccagtcggacgctgatgccttcatt
atgctgggctacctgaatgagcatctgcagctgaagaggcaggccttacaggcttaccaa
agagctgttgaactgttgcaatccatgtcctcaacagaagaactgacttttgctctgggc
agctatggccgtgctttgtgcaccgcgggccaatgggaggaggcagtgcatgtctataat
tctactccactgcaggagctcagtgatctggcggggctggctcttgcctactgcagggca
ggactcatcccagagagcattagtgcctatgaacgtgccttggctgtggcttccactgag
aaggagaaagcttacatcttgacagctctggccctgctgcagcatcggcagggcagccta
gactcagccaagagtctgctgtttaagtgctcaatgttaaaggagccaatccctgagtct
ctgctgtgcttatgtgccctggggttggtccacagtgatgctacactagctgctgctgcc
ctgactgagctgctgaagcaaggttcagcctctgggagtgttgtagagcagcgatgttta
cttacctgcaccttgttggccctgcaaggtaactacagtgcggtgcaaagagaggcttcc
agagctgtgcacagcaatcctggaaacccgtctctgtgggccctgctgtccagagtggta
ccacagtactaccccaggaaagcaaatggtggagcaatggccggccatgtagcctgtctc
tccagtatgacgcaaggaaagagggcgttgttgtacagtggagtgaaccagctggctagt
ggaagacactctggagaggacagtcacaggaatgcactgaagaccatgcagagagctgtg
ctgctctgtcctgatgatccagcagcatgggcgggattaatgggtgcctgccacacagaa
aacacatcctgttatctttctggttctgccccttgcagacaaggactggagaaaatcctc
atggcagtggtttctgagaaagtgcgtaatgtggaggaaatagagcgccctctagcccag
actttagaaggctgggtcctgcaacaggcagttactggtctcgtgctggctggacagctg
gagcaggcggaagccctctgctcacaggtgctgaatgtttctccagaacacccagcagtg
atgctgtcactgagacaggtgcagtgtcagcgcctccttctggccaaaggtggtactgtc
ctcccagactcagtgctggagcagctcaacaaaacagtgatgatgaaccccacaaaccta
ggggcatggcattggctggctgaggtgtatcgtagccagggtctgctggtccaggcagtt
atggcttacaggcagagtctgcagcttgcctcacagctcggcctgcacagcagccaggtt
tccagcctgctgcgactagccctgcttgctctagtaccctgtatggcaggtgtcccagga
aatgactggaaggacctggtactagaagccacaactgaggttttgaagctgggctcctcc
cctatggcccaactcttccaggccctgctccagtatgtgaccaagatggcagctagggaa
acgaggcgtttgttggagaggctggtgtacgtttcctctcaagacttcccagtgacagtg
gtgcaggtggccagctggtacctcctcagacacttgcatgccaaaaatgaccaggagctg
atcactgtccttttgcaacatgccaaaatgaagcgagataaaagactgctggagtttgat
tcactgcttgcctcttcttcatcctga
DBGET
integrated database retrieval system
