Seriola lalandi dorsalis (Yellowtail amberjack): 111659412
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Entry
111659412 CDS
T06058
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111659412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111659412
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111659412
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111659412
NCBI-ProteinID:
XP_023268135
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MLTWISGALPQPLSPKLSRANSTTQEENTTASKPEDEKGMIAWLTQGLEKVVPHPQAELK
SKESPPAEPPAEVQQPAAPPAPDPQVVTVVQAAPEPDQGQDKDQDQNQEDKTDNKPFPPR
MMDWIKQGIEKVVPQPEIQVRPKTADNEKSDTPASTKAAAPPAAPTATKPAADPEKSSKE
EEQQPNVVGWIVTEFSRMLPQPVPKDAASDELQSISITQKKTDLVLEDIEQDGDKDAEQH
KKEREDAMIQMEQVTPLMERLQQDRLEAARVAEEMAMKAAEEAVRQLEVEHSAKIVIETL
PESNEQLPNILEEENEDDPEASSAGKGLSILFVPCCTPFRLQNLQEDSDDSTDNTSPVGN
KVTVENIEEDKKPDEADFKRSLLDVCPAADDAEAKTQPTESEPAEEVTPSSTDVEPASER
RDLESPVTQQPEAPGAPTITTDQDDEAAEDDGCGGSCGRSLGEAPLLKVQDVDPGRGRNI
PQIITTPELESMTLTVPDMELSKLSQAAEDLKAWSSQGDLLTADEETRPLSAASVGSVVI
QDRLIELVRLFKGRTEWQRDRLVDPDESEGESPSASPTKAPPPPPPPPPPGEEKKEEAPA
AAEEEEEEEELGFSFELLGHPVKLPKLPKLPLMPDWLRAIVEYRFPSSIDPFTDLIYVIW
LFFVVAAWNWNVWLIPVRWAFPYQTPENIHLWLLADYTCDFIYIADILIFQPRLQFVRGG
DIVCDKKDMRENYMTTERFKMDIISLFPMEIFYFFTGVNSLLRFPRLLKYMVFFEFNDRM
EAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGSTKWVYNGKGNAYIRCYYFA
VKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDS
TAKYMNSYNIPQEVQNRIKTWYDYTWKSQGMLDEQELLVQLPAKMRLDIAVDVNYAIVSK
VALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLQMVF
VTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKK
AKKMLTKDKKPDEKEEGKEVEVIPPRPDTPEMFKAALKVTEQAGLEGTFAKLKKTYKPSE
STGEAPSSISPLPPPSPMHRRSPIPRAPVQDDDDTVAETADSSVLIRMTPRHQGEEVLSV
EVVPGEGGEEQH
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtggatcagcggagctctgcctcaacctctctcacctaaactgagccgggcc
aactccaccacccaggaggagaatacaacagccagtaaacctgaagacgagaaagggatg
atcgcttggctcactcagggtttggagaaagtagttcctcatcctcaggctgagctgaag
agtaaagagtcaccaccagctgagccgcccgctgaggtgcagcagccagccgctccacca
gcaccagaccctcaggtggtcaccgtggtccaggcggcaccagaaccagaccagggccaa
gacaaagaccaagaccaaaaccaagaggacaaaactgacaacaagcctttcccacccagg
atgatggactggataaaacagggaatagagaaggtggttcctcagccagagatccaggtc
cgcccaaagacagccgacaacgagaagagtgacactcccgcttccactaaagctgcagct
ccacctgcagcaccaacagctactaaaccagccgccgaccctgagaagtcttctaaagaa
gaagagcagcagcccaatgttgtgggctggatcgtcactgagttcagtcgcatgttacct
cagcctgtaccgaaggacgcagccagtgatgagttgcagagcatcagcatcacacagaag
aagacagacctggtcctcgaggacatcgaacaggacggggacaaggacgcagagcagcac
aagaaggagagagaagatgcaatgatccagatggagcaagtgactccactgatggaaaga
ctgcagcaggaccgtctggaggcggcccgtgtcgcagaggagatggctatgaaggcagcg
gaggaggcagtccgccagctggaggtcgagcattcagcaaagatcgtcatagaaacgctg
ccagagtccaatgagcaactgcccaacatcctggaggaggagaacgaggacgacccagaa
gcttcctctgctggcaaagggctctccatcttgtttgtcccttgctgcactccgttcagg
ttgcagaacctgcaggaggacagtgatgacagcacagacaatacaagtcctgtgggaaat
aaagtaacggtggaaaatattgaggaagacaaaaaacctgacgaggccgacttcaaaagg
tccctactggatgtctgtccagctgcagatgatgctgaggccaagactcaacccactgaa
tctgaaccagcagaggaagtcactccatcatcaacagatgtggagccagcatcggagagg
agagacctggagagtccggtcacccaacaaccagaagctccaggggccccgaccatcacc
acagaccaggatgacgaagcagcagaggacgatggatgtggagggagctgtgggcggagt
ctgggtgaagctccgctgctgaaggtgcaggacgtggatccgggaagaggccggaacatc
ccccaaattatcacaaccccagaactggagtccatgactctcactgtccctgacatggag
ctgtcgaaactcagtcaagcggctgaggatctgaaggcctggtccagtcagggagacctg
ctgactgcagatgaagagacacgtcctctgtcagccgccagtgttggtagcgtcgtgatc
caggaccgtctgattgagctcgtcaggctgtttaaaggtcgaacagagtggcagagagac
cggctggtggacccggatgagtctgagggggagagtccctcagcctctccaaccaaagct
ccacctccccctcctcccccacctccaccaggggaggagaagaaggaagaggctcctgct
gcagcagaagaagaagaagaagaagaagagttggggttcagttttgaacttttaggacac
cctgtgaaacttcccaaactgcccaaacttcccctgatgcccgactggctccgagccatc
gtggagtatcgcttcccctccagcatcgaccccttcactgacctgatctacgtgatctgg
ctgttcttcgtggtggcggcctggaactggaacgtgtggctgatcccagtccgctgggcg
ttcccctaccagacgcccgagaacatccacctgtggctgctggccgactacacctgcgac
ttcatctacatcgcagacatcctgatcttccagcccagactgcagttcgtccgcggagga
gacatcgtgtgtgataagaaggatatgagagagaactacatgaccacagagaggtttaag
atggacatcatcagtctgtttcccatggagatattttacttcttcaccggagtgaactct
ctgctgaggttccctcggctgctgaagtacatggttttctttgagttcaacgacaggatg
gaggctgtgatgaagaaagcctacatctacagggtgatccggacctccacctacctgctg
tactctctgcacatcaatgcctgtctcttctactggggctcagactacgaaggactggga
tccaccaagtgggtctacaacgggaaaggcaacgcttacattcgttgttattactttgct
gtgaagacgctgatcaccatcggaggtctgccggaccccaccaccgtctttgagatctgc
ttccagctcatcaactatttcgttggcgtctttgcgttttccatcatgattggtcagatg
agagacgtggtcggcgcagcgacagccggagagaactactaccgcgcctgcatggacagc
accgccaagtacatgaactcctataacatcccccaagaagtccagaaccgcatcaagacc
tggtacgactacacctggaagagccagggcatgctggatgaacaggagctgctggtgcaa
cttcctgccaagatgagactggacatcgctgtggacgtcaactacgccatcgtcagtaaa
gtcgccctgttccagggctgtgacagacagatggtgttcgacatgctgacgaggctcaag
tccgtcgtctacctgcccggagacttcgtctgtaagaagggggagatcggcagggagatg
tacatcatcaaacagggggaggtgcaggtggtgggcggtcctgacctgcagatggtgttt
gtcaccatcagagccggctcggtgtttggagagatcagcttgttggcaggaggtggaggc
aaccgacgtactgccaacgtgaaggcgcacggattcgccaacctcttcatcctggacaag
aaggacctggcagagatcctggtccactacccagagtcccagaaactgctccgcaagaag
gcgaagaagatgctgacgaaggacaagaagccggatgagaaggaagaaggtaaagaggtg
gaggtcatcccccccagaccggacacccccgagatgttcaaggcagcgctgaaggtgacg
gagcaggcgggactggagggaacctttgccaaactgaagaagacctacaaaccgtctgag
agcacaggagaggctccatcctccatctctccgctcccccctccctcgccgatgcaccgc
cgctctccgattcctcgcgctccggttcaggacgacgacgacacggtggcggagacggcc
gacagctccgtcctcatcaggatgacgccgcgacatcaaggggaggaggtgcttagtgtg
gaggtggtcccgggggagggaggggaggagcagcactga
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