Seriola lalandi dorsalis (Yellowtail amberjack): 111666071
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Entry
111666071 CDS
T06058
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111666071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111666071
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111666071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111666071
NCBI-ProteinID:
XP_023277047
LinkDB
All DBs
Position
Unknown
AA seq
1565 aa
AA seq
DB search
MSIFCFFSTVKSPPLKNTDEVTEDGQGQTGVLGWLSNGFVSALPQPSSSPRLSRANSDAR
SGEDGERSGVIGWVTQGLTKVLPQPDEKYRETNDDNNEEHTEVYEVATMPDFDPLPHIPV
VEMVSDDEVSEVECLNPQFPPNMVNWIKQIIPQPVILPPGAVPIEPSSKSSRSSLDKLLS
PPPESLSGISLDTDSKASGVVGWFVSGLGLKLPQPAIQPKDDAEGAAEVLQKASSKLKPD
MVLEDMESDHEGQQECEGGSKAEAPSTSLTPPSPATHRQLEATQETQSCSLSMASMQSQQ
CGDASPVPEPTECVTKISQEDAETQTGRWTPFIESIKKEAEDGALATMEERLLQERMEMA
RMAEEVARQTAEMAIRQMASEGHSIKLSLGSQELLDEPEVELPVPEEEEEEEESEEEHSK
VTEREESIAVEEQEEEEETEEPAATEPEPKKEAEPQCISPSPPPSPEPVKSCESEPESEP
EPEPEPVTKTQEANSEAEPITRQPQKAEEDGQGTNADKAAEKEEEATGDGCGAPVSCDAF
KSCLMRIPHTSECLGNINAFFKENGISPPKIPSMPKLPTQLSDVTKYLPTLPPELRQELS
QIRLTQVPRNIAQTLTEILPKNSEGSVGPSLSSLSQSFSNIPEKLSQFPSRTQQYFLNVR
NRLNSLMPQDAXEHQQQQKQKQDVELNRLVRHSPLPPPHHPQLRSRSPSPSSPSGSALEL
PNVPSYPRLPPIVSPPSKQLNSPSHQLSGLSNPAFFIEDDSDISAIRPAETSSLSLRPAV
NVEDVDSDHERKGGAGGGGGGNEEQSTIPHILTPQDPKLTTLTVPVTPSGGRQSKGDKDR
RLQSQSEDDDEEGSIPVRAWPSQSSLHSTDDILKERPASSASQTSTVVNERLQELVRMFK
ERTEKAKEKLIDPDSSDEDSIISSPPQASAPQPAPGAQLVDGGEKEAKAGGVESEAEEEQ
SSSCCKVKAPRWIRACVHYCFPASIDPFTNLMYVLWMFLVSLAWNWNVWFIPVRWAFPYQ
TPDNIYYWLLTDYLCDLIYILDITVFQPRLQFIRGGDIVSDKKEMRKNYMKTKRFKFDVA
SLVPLELFYFKTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLH
CNACLYYWGSALKGLGSTKWVYNGEGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLI
NYFVGVFAFSIMIGQMRDVVGAATAGQTYYRTCMDNTIKYMSSYRIPKDVQNRVKTWYNY
TWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVY
LPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRT
ANVIAHGFANLFILDKKDLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEEAKEPRQVP
AAPVRQETPRLLRAALEMTEKSSRLKGALAKVKEKTNKSSISLQPSISSSLPPPSPTSSS
GPDRDADTPSPVSASSTTFHSASRGHNNSSVMGSQSQSDADKTLAVDQRKEDVSEGVGNE
GEKRK
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttttgttttttttctacagtgaagagtcctccactgaaaaacacagatgag
gtcacagaggatggccaggggcagactggagtattgggctggctgtccaatgggttcgtc
agtgctctgccacaaccttctagctcccctcgcctcagcagggccaactctgatgccagg
tcaggagaggatggagagaggtctggagtgattggctgggtgactcagggtctgaccaag
gtgctacctcagcctgatgaaaagtacagagagactaacgacgacaacaatgaagaacac
actgaggtctatgaggtagcaacaatgccagattttgatcccctcccacacatcccagtg
gtggagatggtgtcagatgacgaggtgtcggaggtagagtgtctgaaccctcagttccct
cccaacatggtgaactggataaagcagatcatcccccagccagttatactgccccctggt
gccgtgcccatagaaccatcatccaagtcctcccgctcatctctggacaaacttctgtct
ccaccacctgaatctctcagtggaatctcactggacactgacagcaaggcctcaggtgtg
gttggctggttcgtgtcgggactcggcctgaagttgcctcagcctgccattcaacccaaa
gatgatgctgagggtgcagctgaagttctacagaaagcttcatccaaactcaaacctgac
atggtactggaagacatggagtcagaccacgagggtcagcaggaatgtgagggtggttcc
aaagctgaagcaccttccacatcgctgactccaccatcgccggcaacacaccgacagctg
gaggcaacacaggagacacagtcctgttcactgtccatggcatccatgcagtcccagcag
tgcggtgatgccagtccagtaccagagccaacagagtgtgtgacaaaaatatctcaggaa
gatgcagagactcagacaggccgctggacgccatttattgagagcatcaagaaggaggct
gaagatggagctttggccaccatggaggaacgtctgctgcaggagcgcatggagatggca
cgtatggctgaggaggtggccaggcagacagctgagatggccattagacagatggccagt
gagggacactccatcaaactctcactagggagtcaagaactgctggatgagcctgaagtc
gagctgccagtgccagaagaagaagaagaagaagaagagagtgaagaagagcacagtaaa
gtcacagaaagggaagagagcattgctgtggaagaacaggaggaagaggaagagaccgag
gagcctgccgccacagaaccagagccaaagaaggaagcagagcctcagtgcatctcccca
tctccacctccaagtcctgaaccagttaagtcctgtgagtcggagcctgaatctgaacca
gaaccagaaccagaaccagtgactaagacccaggaagccaattcagaagctgagcctatc
acccggcagccgcagaaagcagaggaagacggtcaaggcaccaacgctgacaaagctgct
gaaaaagaggaggaagctacaggggatggctgcggtgctccagtcagctgtgatgcattt
aagagttgcctgatgcgcattcctcacacctctgagtgcctcggcaatatcaacgcattc
ttcaaagagaacggcatctcccccccgaaaataccctccatgcctaagctacccacccaa
ctctctgacgtgaccaagtacttacccaccttaccccctgaattacgccaagagctctcc
cagatcagactcacacaggtcccccgaaatattgcccagactctgactgaaattttgccc
aaaaactcagagggttcggtcggtcccagtctgtccagtctttcccagagcttttcaaac
atcccggagaaactctcccagtttcccagccggacgcagcagtacttcctcaacgtccgg
aaccgcctcaacagccttatgccccaagatgcctaagaacatcaacaacagcaaaaacag
aagcaagacgtagaactcaaccgactcgtccgacactcccctctccctcctcctcaccat
cctcagctccggtcccgctccccatctccatcctcccccagtggtagcgccctcgagttg
cccaatgtgccatcctatccgcgtctgcctccaattgtcagccccccgtcaaagcagctc
aactccccgtcccaccagctgtctggtctctctaacccagcgttcttcattgaagatgac
tcagacatttcagcaataagacccgcagagacctccagcctcagccttcgtccggccgtc
aatgtagaggacgttgactcagaccatgagagaaaaggaggagcaggaggaggaggagga
gggaatgaggagcagagtactatcccccatattctcaccccacaggaccccaaacttaca
accctcaccgtccctgtgaccccatctggaggtcgtcagagcaaaggagataaagataga
aggctgcaatctcaaagtgaagatgatgatgaagaaggaagcatccctgtcagagcctgg
cccagccagtccagcctgcacagcacagacgacattctgaaagaacgtccagcatcttcg
gccagtcagaccagcacagtggtgaacgagcgtctgcaggagctggtcaggatgtttaaa
gagaggacagagaaggccaaggagaaactcattgaccctgacagctcagatgaagacagc
atcatctcctctcctcctcaggcctcagctcctcagcctgctcctggagcacagctggtg
gatgggggagagaaggaggcaaaagcaggcggggtggagagtgaggcagaggaggagcag
tctagcagctgttgcaaggtgaaagctcctcggtggatacgagcttgtgtgcactactgt
ttccccgccagcatcgaccctttcaccaacctaatgtatgtgctgtggatgtttttggtt
tctcttgcgtggaactggaacgtatggttcatcccggtgcgctgggctttcccctatcag
actccagacaatatttactactggctgctgaccgactacctgtgtgacctcatttacatc
ctggacatcaccgtcttccagccacgtctgcagtttattcgtggaggggacatagtgagt
gacaaaaaagagatgaggaagaattacatgaaaaccaaacgcttcaaatttgatgtagcc
agccttgttcccttggagctcttctattttaaaaccggcatcaaccccctgctccgctta
cccaggctgctgaagatcaactccttcttcgagttcaacgagcgtctagaggccatcttg
accaaagcctacatctacagggtgatccgtaccaccacctatcttctttattgtctccac
tgtaatgcctgtctctactactggggctctgccttaaaaggactgggatctaccaaatgg
gtgtacaatggcgagggcaacagctacattcgctgttactactttgcggtgaagaccctg
atcaccattggaggtctgccagaccccaccaccctgtttgagattgtcttccaacttatc
aactactttgttggagtctttgccttctctatcatgattggacagatgcgtgatgtggtt
ggtgcagccacagcaggtcagacctactaccgcacatgtatggacaacactattaaatac
atgtcctcatatcgcatccctaaagacgtccagaaccgcgtcaaaacctggtacaactat
acttggcaatctcaaggcatgctggatgagcaggagctgctgactcagttgccagataaa
atgcgtctggacattgctatagacgtcaactactccatcgtgagcaaagtccctcttttt
cagggttgtgaccgacagatgatctttgatatgctgaaaagcctgcgctctgtcgtctac
ctgccaggggattatgtctgcaaaaagggcgaggtgggtcgggagatgtacatcataaag
gcaggggaagtgcaggtggttggaggtcctgatgggaaaacggtctttgtcactctcaga
gcaggatcagtctttggagagatcagtttgcttgcagtaggcgggggtaataggcgcaca
gccaatgtgattgctcatggttttgccaatctcttcatcctggacaagaaagacctgaat
gagatcctggtccactaccctgagtccaagaaactgctccgcaagaaggccaggaagatg
cttaccaaggggaagaaacctgagcccaaagaagaagctaaggaaccccgtcaggtaccg
gcagccccggtcaggcaggagactcccagactgctgagagctgccctggaaatgacagag
aagtcctctagacttaaaggagctctggctaaagtcaaagagaagaccaacaagtccagt
atctcattacagccctccatctcttcctccctcccccctccatctccaacctccagctct
ggacctgacagagatgcggacacgccttcgcccgtctctgccagctccaccacatttcac
tctgcatcccgcggtcacaacaacagctctgtgatgggatcacagtcccaaagcgacgca
gacaaaacgctcgctgtggaccaaagaaaggaagatgtcagtgagggtgtagggaatgag
ggcgagaagagaaaataa
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integrated database retrieval system
