Seriola lalandi dorsalis (Yellowtail amberjack): 111666091
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Entry
111666091 CDS
T06058
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111666091 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111666091 (cnot1)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111666091 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111666091 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
111666091
NCBI-ProteinID:
XP_023277073
Ensembl:
ENSSLDG00000014816
LinkDB
All DBs
Position
Unknown
AA seq
2399 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDNPLHYQKSLKPSTHLFTQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCASVDECRNIILQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFIIRDSKGLQIVVYGIQRGLGIEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADYPCHNVATDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQVDPLSGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSSLGMPTVSTDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKE
IDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFP
QYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAALDRFKN
RLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQV
QAQAQSQQSGGPKAPQQGQPSTLVTTTTTTTTAAKTTTITRPTASSGFKKDVPPSINTTN
IDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYL
VMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKN
LGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRP
QNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKLKSLEE
QLSAPKKEAKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVYA
LAGLAPHININVNIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRK
DFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQRE
MMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVL
TYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWAT
DDVAQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKA
VEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNV
EAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADLF
HTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDP
PGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEM
CVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNK
VLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHI
LRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELN
KPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDP
FTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVGRH
LFDDVSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSSPSMSTITHSAHMDIFQNLAVD
LDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRP
HPWGLLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaattacagagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggattttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaactttatctctactctctgttacgccattgacaatcccctgcac
taccagaagagtttgaagccatcgacccacctattcactcaattgagtaaagttcttaag
ctcagcaaagtccaagaggtgatatttggccttgctttgctcaactccagcaacacagac
cttcgcggctttgctgcgcagttcatcaagcagaaacttccagacctcctgcggtcatac
gttgacgctgatctcggaggaaaccaggaaggtggcttccaagacattgccatagaggtc
ttgcacctactgctctcccatctactgtttggccagaagggagccagcggggtagggcaa
gagcagattgacgccttcctgaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacaggatcctg
ccagactcgggggagttagctaagaccatgatggagagttctcttgcagaattcatgcaa
gaagttggctatggcttctgcgctagtgtggatgagtgcagaaatataatcctccagtat
ggggtgagagaagtgacggccagccaggtagccagggtcctgggcatgatggctcgtacc
cactctggcttaactgatggcatccctctacagtccatctccgctccaggaagtggtatc
tggagtgatggtaaggataagaatgatggctcgcaggcacacacttggaatgttgaggtt
ctcattgacgtcgtcaaagaagtgaatcccaacctgaacttcaaagaggtgacgtacgaa
ctggatcacccaggttttataatccgggacagtaaaggcctgcaaatagtggtgtatggc
attcaaagggggttgggcatcgaggtgttccctgtcgatctcatctatcgtccatggaaa
cacgcagagggacagctgtcgttcattcagcactccctgatgagcccagaggtgttttgt
tttgctgactacccttgccacaatgtggccactgacatccttaaggccccaccagaggat
gacaaccgggagattgccacatggaaaagtctggacctggtggagagcctgctaaggctg
tctgaagtgggtcagtatgagcaggtgaagcagctgtttagcttcccaatcaagcactgc
ccagatatgttagtgctggcattactgcagatctccacctcctggcacacactgcgccat
gaactcatctctaccctcatgcccatctttctgggcaaccaccccaattctgccattatc
ctgcactacgcctggcatggacagggacagtctccctccatccgtcagctaataatgcat
tctatggctgagtggtacatgagaggggagcagtatgaccaagctaagctgtcacgcatt
ctggatgtggcccaggacttgaagtctctatcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctcccgccgtgaatacctcaaacttgataaatgg
ctgactgataaaataagagagcatggggaaccttttatccaggcgtgtgtgacattcctg
aaaaggcgctgcccatccattatggggggtctggccccagacaaggaccagcctaaaagc
gcccagctgccaccagagaccttagccaccatgctggcctgcctccagtcctgtgcaggg
agtgtgtcccaggagttgtctgagaccatcctgaccatggttgccaactgcagcaatgta
atgaataaagcccggcagccgccaccaggggtaatgccgaaaggacgtgcccccagcacc
agcagcctagatgccatctcacctgtacaggtggaccctctttctggcatgggttccttg
aacttggggggcacagccacctcccacactcagagcatgcagggtttcccaacctcactg
agttcagcttttagtaatccccagtccccagccaaggccttcccaccactctccaaccca
aacccgagcacaccatttgggggcattggcagcctgtcctcgcagctccctggtatggac
tctggtcccttgggctcaggcatcggctctggtattggctcgagtctagggatgccaact
gtaagcaccgacccatttggcaccaggaagatgagcacaccaggcctgaatccaccaacc
tttcagcagactgacctttctcaggtgtggcccgaggcaaaccagcactttagtaaggag
atagacgatgaagcaaacagttacttccagcgcatctacaaccacccacctcacccaact
atgtctgtggatgaagtactggagatgcttcagaggttcaaggattctaccatcaagcgg
gagcgagaggtgttcaactgcatgcttcggaacttgtttgaggaataccggttcttcccc
cagtaccccgacaaggagctgcacatcactgcctgcctttttggtggaattattgagaag
ggtcttgttacatacatggccctgggcttggccctccgatatgtccttgaagccttaaga
aaaccgtatggatctaaaatgtattactttggaattgctgccctagataggttcaagaac
agactaaaggactaccctcagtattgtcaacacctcgcttcaattgcccacttcttgcag
ttcccccatcatttacaagagtgtgtgcagtatatcgagtatggccaacagtcacgggac
cctccggtgaagatgcaaggctccatcaccacacctggaagtctagcactggcacaagtt
caagcccaggcccagtcacagcaatctggtggtcccaaagccccacagcaaggtcagccc
agcacccttgtcaccaccaccacgaccacaacaacagcagccaagaccaccaccattaca
agaccaacggcttccagcggcttcaagaaggatgtgcctccatccataaacactaccaac
attgataccctgctggtggccactgaccaaacagaaaggattgtagagcctccagagaat
gtccaggagaagattgcttttatcttcaacaacctttctcagtccaacatgacacagaag
gttgaggagttgaaagagacggtgaaggaggagtttatgccctgggtgtctcagtaccta
gtgatgaagcgtgtcagcattgagcccaacttccacagtctgtactccaactttctggac
acgctcaagaacccggagtttgtaaagatggttctgaatgagacttacagaaatatcaag
gtcctcttgacctcagacaaggcagctgccaatttctctgatcgctccctgctgaagaat
ctgggccactggttgggcatgattacactggccaaaaacaagccaatcctctatacagat
ctggaggtcaagtctctgttactggaggcctatgtgaaaggccagcaggagctactgtat
gtggttccttttgtggccaaagttttggagtccagtctacgtagcatggttttcaggccc
cagaacccctggactatggccatcatgaatgtccttgctgagcttcatcaggaacatgac
ctcaagctgaacttaaagtttgagattgaagttctgtgtaagaacttgtccctggacatc
aatgacctgaagccaggaaatctgcttaaggacaaggagaagctaaagagcttggaggag
cagctatccgcaccaaagaaagaggcaaagcccccagaggagatgctaccagtttctacc
acaggagactttgttccgtttgcagctcctccctcaactccagctgccaccaccaccact
tgcacaaccaccgggccccccaccccacagttcagttaccatgacatcaatgtgtatgcc
ttggcaggcctggctccacacatcaatataaatgtcaatatccctctgctacaggcccat
cctcagttaaagcagtgtgtacgtcaatcagtagagcgagctgttcaggagctagtgcat
cctgtggttgatcgctctatcaaaattgccatgacaacctgtgagcagattattaggaag
gactttgccctggattcggaggagtcccgcatgcgtgtcgctgcccaccatatgatgaga
aacctgactgcaggcatggccatgatcacctgccgtgagcccctgctcatgagcattgcc
accaaccttaagaacagctttgctgctgcactgagggcacctaccccccaacagagggaa
atgatggaagaggctgcagcacggattgctcaagacaactgtgaattggcttgctgcttc
attcagaaaacggccgtggagaaagctggtcctgaaatggacaagagactagcaacggag
tttgagctgagaaagcatgcacgccaagagggacggcgttattgtgatcccgttgttctg
acttaccaagctgaacgtatgcctgagcagatcagactcaaggtgggaggagtggacccg
aaacaactggctgtatatgaggagtttgccaggaacgttccaggtttcctacccagtaat
gatctctcacagcccactggattcttggctcagcccatgaagcaacaggcatgggccaca
gatgatgtagctcagatctacgataagtgcatggcagacttggaacaacatcttcatgcc
atacctcctgcccttgccatgaaccccctgacccaggcattgcgcagcctgctggaggct
gtggctttggccaggaactccagggatggcatcgctgcacttggcctgctgcagaaggct
gtggaaggtcttcttgatgctactagtggggctgatgctgacttgctgcttcgctacaga
gagtgccacctgctggtgcttaaagccctgcaggatggacgtgcctatggaccacagtgg
tgcaataagcagatcaccaggtgtctgattgaatgtcgtgatgagtacaaatacaacgta
gaagcagtggagcttctgatcaggaaccatcttgtgaatatgcagcagtatgacttgcat
ctggcacagtcaatggaaaatggattgcactacatggcagttgcatttgccatgcagttg
gtgaagctgttgctggtggatgaacgcagtgtcagtcatgtcacagaggctgatctgttt
cacacaattgagactttaatgaggacctgtgcacactccagagccaacgcacccgagggt
cttccccagcttatggatgttgttcgctccaactatgaagccatgattgaccgggcccac
ggtggacccaactttatgatgcactctgggatttcacaggcttcagaatatgatgatccc
ccaggcctgagggagaaggcagagtacctcttgagggagtgggtgaacctctatcactca
gctgccgctggcagggatagcaccaaagcattttctgcctttgttggccagatgcaccag
cagggtatcttgaagacagatgacctgatcacaaggttcttccggctgtgcacagaaatg
tgtgtggagataagctatcgggcacaggctgagcagcagcacaacccagcagccagtgca
gccatcatcagagccaagtgttaccataacctggatgcctttgtgaggctcatagccctg
ctggtcaaacactctggagaggccaccaatacagtgacaaaaatcaacctcctcaacaag
gtgctgggtattgtagttggggtgttgatccaggaccacgatgtccgtcagacagaattc
caacagctgccataccaccgcatttttatcatgctgctgttggagctcaatgcccctgaa
catgtcctggaaaccatcaacttccaaaccctcaccgccttctgcaataccttccacatc
ctgagacccaccaaagcacccggctttgtgtacgcctggctggaactcatctcccatcgc
atcttcattgccaggatgctagcgcacacaccacagcagaagggctggcccatgtacgca
cagctgctgattgatctcttcaagtacctggcccctttcctgaggaatgtagagctcaac
aaacctatgcaaatcctctacaagggcacactgcgagtgctcctggtcctgctgcatgac
ttcccagagttcctgtgtgactaccattatggtttctgtgatgttattccaccgaactgc
atccagctgcgaaacctcatcctcagtgcctttccacgcaacatgaggctccctgaccct
ttcacacctaatctcaaggtggacatgctgagtgagatcaacatcgctccccgtatcctc
accaacttcacaggcgtcatgccttcccagttcaagaaggatctggactcgtacctgaag
acccgatcaccggtcactttcctgtccgaactgcgcagcaacctgcaggtaggcaggcat
ctattcgacgatgtgtccaatgagccaggaaatcgctacaacatccagctgatcaatgct
ctagtgttgtatgtaggcacacaggctattgctcacatccacaacaagggcagcagcccc
tccatgagcacgatcactcactctgcacacatggacatcttccagaacctggctgtggat
ctggacactgagggacgttacctgttcttgaatgcaatcgccaatcagctgcgatacccc
aacagccacactcactacttcagctgcactatgctctatctgtttgctgaggcaaacaca
gaggccatccaggagcagatcaccagggttctgttggagcggctgatagtgaacaggcct
cacccatggggtctccttatcaccttcattgagctgatcaagaatcctgccttcaagttc
tggagccacgactttgtgcactgtgcccctgagattgaaaagctgttccagtcagtagcc
cagtgctgcatgggacagaagcaggcccagcaggtgatggaaggcaccggtgccagctag
DBGET
integrated database retrieval system
