Seriola lalandi dorsalis (Yellowtail amberjack): 111666190
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Entry
111666190 CDS
T06058
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111666190 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111666190 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111666190 (vps36)
Membrane trafficking [BR:
slal04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
111666190 (vps36)
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111666190 (vps36)
Exosomal proteins of colorectal cancer cells
111666190 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
111666190
NCBI-ProteinID:
XP_023277212
Ensembl:
ENSSLDG00000015644
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVVLLSTHRLIWRDVKNHECCIA
MPLSQIIFFEEQAAGIGKSAKIVIHLHPVPANKEPGLYQHSKYSYIKLSFKEHGQIEFYR
RLTEEMTQKRWESTPVSQPIPTGTGSQAGKTRAVGIVGIERKIEERRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttttcgtggtcaaatgggcttttagaaataaatgaaactttagtgatccag
caacgaggtgtgagactgtatgacggagacgataaggctaagctggatgttggagttgtc
ctgttgagcacccatcggttgatctggagggacgttaaaaatcatgaatgctgcatagcc
atgcccctgtcacagatcatcttctttgaggagcaggctgcaggaataggaaagagtgca
aaaatcgttattcacctgcatccagtgcctgccaacaaagagcctggtctctaccaacac
agcaaatactcctacattaaactgtccttcaaagaacatgggcagatagagttttacagg
aggctaacagaagagatgactcagaaaagatgggagagtacaccagtttcacaacccatc
cccacaggaactggctctcaggcaggaaagacacgtgctgtggggattgttggcatcgag
agaaagatagaggagaggagaaaagaaacggacaaaaacatttcagaggcctttgaggac
ctcagtaaactgatggtgaaggccaaagagatggtggagctgtccagatctatagccaac
aagatcaaagacaagcagggagatataacagaagatgagacaatccggtttaagtcctac
ctgctgagtatgggtattgctaacccagttacaagggaaacgcatggatcaggcacacat
taccacatgcagctggctaagcaactgggagatatgctacaggcccctctcgaggagcgt
gggggtatgatggctctgactgaggtgtactgtctcgtcaaccgtgctagagggatggag
cttttgtctccagaagatttggtaaacgcatgcaagatgtttgagtcgttgaagctccca
ctgaggctgcgcgtgtttgacagtggtgtgatggtggtccagctgcagtctcacagcgag
gaggaaatgatagcctcagcactggacaacgtgtcagacaaaggctccttgacagcagag
gagtttgccaagctcttgggtctctctgttcttctgtcgaaagagcggttgttgctggct
gagaagatgggccacctgtgtagagatgactctgttgagggcttgcgattctacccaaac
ctgttttga
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