Sugiyamaella lignohabitans: AWJ20_125
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Entry
AWJ20_125 CDS
T05270
Symbol
PEP8
Name
(RefSeq) retromer subunit PEP8
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AWJ20_125 (PEP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_125 (PEP8)
Membrane trafficking [BR:
slb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
AWJ20_125 (PEP8)
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Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
FbpC_C_terminal
Motif
Other DBs
NCBI-GeneID:
30033031
NCBI-ProteinID:
XP_018734375
UniProt:
A0A161HK22
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Position
A:complement(404377..405324)
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AA seq
315 aa
AA seq
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MASFFKSQLDIEIRLDGEDTRTHVEIKQSNGQKAIAGTGNPSSANALARRRSVPLYMDGE
SVKGSVTIRPRDGKRLEHMGIKVQFVGSIEQSSDRGQHDDFLSLAQELAAPAELRHPETY
DFEFKNVEKQFESYNGINVKLRYYVKVTVFRRMADIVREKDLWVYNYKVPPEGISSIKMD
VGIEDCLHIEFEYSKSRYHLKDVIVGRIYFLLVRLKIKHMELSIIRRETVGVAPNQYNES
DTLVRFEIMDGAPVRGETIPIRLFLGGFDLTPTFRDVNKKFSIRTFLSLVLIDEDSRRYF
KQSEIILYRNPQDET
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttttcaagtctcagttggatattgagatccgtcttgacggcgaggacacc
cggactcatgtcgagatcaaacagtcgaatggccaaaaagccattgcggggacgggcaac
ccgtcttcggccaatgctcttgcccgtagaagaagtgttcccttgtacatggatggcgag
tctgttaaaggttcggtcacaattcgtcctagagatggtaaacgtttggaacatatgggt
attaaagtgcaatttgtcggtagtatagagcagtcgtcagatcgtggtcagcacgacgac
tttttatcactggctcaagaattggctgctcctgctgaattacgacacccagagacgtac
gatttcgagttcaaaaacgtggaaaaacagtttgaaagttataatggaattaatgtcaag
ctacgatactatgtcaaagtgacggtgttccgccggatggccgatatcgtcagggaaaag
gatctctgggtatataactataaagttcctccagagggaatcagttcaatcaagatggat
gtgggtattgaagactgtctgcatatcgagtttgaatattccaagtcccgataccacctg
aaagatgtcatagtaggccgaatctatttcctgcttgtacggctcaagataaaacacatg
gaactgtcgataatccggcgagaaacagtgggtgtggctcctaatcaatataacgagagc
gatacgctggtacggtttgaaatcatggatggtgcacctgtccgaggcgagactattccc
atccgacttttcctcggcggcttcgacctgacgccaaccttccgcgatgtcaacaagaag
ttctctatccgtacattcctttctctagtgctcattgacgaggactcgcgtcgttacttc
aaacaaagcgagataatactctaccgaaaccctcaagacgagacctag
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