Sugiyamaella lignohabitans: AWJ20_1985
Help
Entry
AWJ20_1985 CDS
T05270
Symbol
SMC4
Name
(RefSeq) condensin subunit SMC4
KO
K06675
structural maintenance of chromosome 4
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
AWJ20_1985 (SMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_1985 (SMC4)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
AWJ20_1985 (SMC4)
Condensin II
AWJ20_1985 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
GAS
Motif
Other DBs
NCBI-GeneID:
30033846
NCBI-ProteinID:
XP_018736874
UniProt:
A0A161HLS3
LinkDB
All DBs
Position
B:68086..71694
Genome browser
AA seq
1202 aa
AA seq
DB search
MRHSKVSALIHNSAAYPNLNSCSVEVHFQDVVDSANGSSTVVPGTELVITRKSFRNNSSK
YMINDKESNFTEVTTLLRERGIDLDHKRFLILQGEVESIAQMKPKADNDNDDGLLEYLED
IIGTSQYKKAIEESLAEVEVLNEDCVQKQDRLKIVETELNSLEDQKNDIVTYLELENELA
FKQSALWQLQAYLCQKRVELSKSIVEEQHAKLKAELDRTTVNSEEIEVLKKDHAQKLKEL
DLIKKTLSEKSKLLSKHEIEKVKVEERKKHLDSKRKKLEKSIEAATHSKVETETWLSNYQ
EESSQLSDQLKGLQKSLENENCQLEAIQDELKDKTAEFTDQIETIQKKLEPWREKTRSKE
SEIAVANSELELLKERESQGEKSLNESKENITITMKEGRAKEREMEKLKKELEHVTSQIS
MGVKECDQASIKLAKMKQQLVNGRQRVDAAKEALSSTTSQNKVLTGLTRLNDSGRIQGFR
GRLGALGTIDAKYDVAISTACPSLDNMVVDTVAAGEQCVDYLRKQNLGRAKFILLEKLPK
RDLSPIQTPENVPRLFDLIVPSAPEYAPAFYSVLFDTLVAKDADQARRIAYGKKRWRVVT
LDGVIVEASGAMSGGGEISRGKMAAGLTEGALSEGQVQELERVQDEHEKKYKIAENTVLT
MQTTLKELQERKPEIELEISKVELDITALTARLNEAKKQSAELAKSLEANRPDPSTLKRS
EEHVAKLEAELKQLRSHSEGLEQDVADLQEKIMDAGGVRLRVQKSKVDGIKEQIELVNTR
LANGLKENAKANNDFKKHSKTIDNCEAEISASTQELEEANKELSEKQLIIQQFEQLVSQL
SDQLEEKQEILDELKSELDAKQKDIDSLRSREIEIKNTIDQHEKTIKDESNSLRSWISQL
QKLQLHDLSEIKAVRVKKEKPLKKSLPRQDVEEGEEAEGNEEDEDVNEDEDVANKSILNK
TELFEYSADELEAMNKAELKREIESLQTKGQNAKVDMQILKDYKRRVEEHDARRLALNES
VTARDTVKKMCDDLRNRRLEEFMTGFNSISGKLKEMYQMITMGGNAELELVDSLDPFSEG
ILFSVMPPKKSWRNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIV
ATYIKERTKHGQFIVISLRNNMFELAKQLVGIYKVNNMTKSIALQNNDYIHGQDSSNTTI
LP
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatagtaaagtgtcagccttgattcataactcagcagcttatccaaatctcaat
tcttgtagcgtcgaagtccacttccaagatgttgtcgattctgccaacggatcttcaact
gtcgtccctggtacagagctggtgattactcgtaaatccttccgaaacaatagctcaaag
tatatgattaatgacaaagaaagtaatttcactgaggtaacaacgctattgagagaacga
ggaatcgatttagaccacaagagatttctaattcttcagggagaggtcgagagtattgcc
cagatgaaacccaaagctgacaatgataatgatgatggtctcttggagtatttggaagac
attattggtacatcacaatataaaaaggctatcgaggaatccctggcagaggtcgaagtt
ctcaatgaggattgtgttcagaagcaggaccgcttgaagatcgtcgaaactgaacttaac
agtctcgaggatcaaaaaaatgatattgtgacctatcttgagcttgaaaatgaactcgca
ttcaagcagtcagctctatggcaactacaagcctacctttgtcagaagagagttgagctc
agcaaatccatcgtcgaggaacaacatgccaaactgaaggctgaacttgatagaactact
gtcaattctgaagaaattgaagttttgaaaaaggatcacgctcaaaagctgaaggagtta
gacttaatcaagaagacactgagcgagaaatcaaaattgctttcgaagcatgagattgag
aaagtcaaggttgaggagagaaagaagcatctggattccaagaggaagaaactggagaag
tccatagaggcagcgacacattctaaggtcgaaaccgaaacgtggctttctaattatcaa
gaagaatctagccagctgtctgaccaactcaagggtcttcaaaaatccttagagaatgaa
aactgccaactagaagctatccaagatgagctcaaggacaagacggctgagtttaccgat
caaatcgaaacgatccagaagaaattggagccatggcgagaaaagactaggtcaaaggag
tctgaaattgccgttgccaacagtgagttagaactcttgaaagagcgcgagtcgcaaggt
gaaaagtcgttaaacgaatctaaggaaaatatcactattactatgaaggaagggcgtgca
aaggagcgagaaatggaaaaactcaagaaggaacttgaacatgtgactagtcagattagt
atgggagttaaggagtgcgaccaggcatcaattaaattggcgaaaatgaagcagcagtta
gttaatggtagacaaagagttgatgctgccaaagaagcgctaagctccactacctcacaa
aataaggtactcaccggattgaccagattgaacgattccggaagaattcaaggcttcaga
ggacgcctcggtgccttaggaaccattgatgctaaatatgatgttgcaatttctaccgct
tgtccttctctcgataatatggttgttgatactgtcgctgctggtgaacagtgtgttgat
tacctgcgaaaacagaacctcggccgtgccaaattcatcctactagagaaattaccgaag
cgagacttatctcccatccaaactcctgaaaatgtcccgcggttatttgacttaattgta
ccttctgctcccgagtacgccccagccttctacagtgtattgtttgatactcttgttgct
aaggatgctgatcaagccagaagaattgcttatggcaaaaagagatggagagttgtcacc
ctcgatggtgtgattgttgaagcgtccggcgcaatgagtggtggtggtgagatttcgaga
ggaaagatggcagctggtcttacagaaggtgcattgtcagagggtcaagttcaggaattg
gagagagtacaagacgagcatgagaagaagtataaaattgctgaaaatactgtgttgact
atgcaaaccacattgaaggagttacaggaacgtaagccagaaattgaattagaaatctca
aaggtcgaacttgatattactgctttgacagccaggcttaatgaagcaaagaagcagtct
gctgagcttgccaaatcacttgaagcaaatcgcccagatcctagcaccctgaagcggtct
gaagagcatgtcgccaaattggaagccgaattaaaacaactaagatcacacagcgagggc
ttggagcaagatgtggccgatttgcaagagaagattatggatgcaggaggtgttcgttta
agagtgcaaaagtcgaaagttgatggtattaaagagcagattgaattagtcaatacgagg
ttagcaaatggcttgaaggaaaatgccaaggctaataacgatttcaagaagcattccaag
accatcgataactgcgaggcagagatttcagcatctactcaagagctagaagaagcaaac
aaagagctaagcgagaaacaattgattattcaacaattcgagcagcttgtttcacaactt
agtgaccaattggaagaaaaacaagaaatccttgatgagctaaaatctgagcttgatgca
aagcagaaagatattgattcgctacggtctcgtgaaatcgaaatcaaaaacactatcgat
cagcatgaaaagaccattaaagacgagtcaaacagcctcaggtcctggatttcgcaatta
cagaagctgcaacttcatgatctaagcgagatcaaggccgtccgtgtaaagaaagagaag
ccattgaaaaaatctttaccaaggcaagatgtggaggagggagaagaggcggaaggcaac
gaagaagatgaagatgtgaatgaagacgaagatgttgccaataagtcgatcctaaacaag
acggaattatttgaatattctgcggatgagctagaggcaatgaacaaagctgagttgaaa
cgcgaaattgaatctctccagaccaagggtcagaacgccaaggttgatatgcagattctc
aaagactataagcgcagggtagaagagcatgatgccagacgtttagcactcaacgagtcc
gtcacggcaagggatacagttaaaaagatgtgtgatgatctacgtaatcgccgtttggaa
gagttcatgacaggctttaacagcatctctggcaagctaaaagaaatgtaccaaatgatt
accatgggtggtaatgctgagttggagctggtggactctttggacccgttctccgagggt
attctgtttagtgttatgcctcccaagaagagctggaggaacatttccaacctttctggt
ggcgaaaagacattaagctccttggctcttgtttttgcactacaccattataaacctacg
ccattgtacgtaatggacgagattgatgcagctttggacttcagaaacgtttctattgtt
gccacttatatcaaggaacgtacaaaacatggccaattcatagtcatctccttgagaaat
aatatgtttgaactcgctaagcagcttgttggcatctataaagtcaataatatgaccaaa
agcattgctttgcaaaacaacgactatattcatgggcaagacagttcaaacaccacaatt
ttaccatag
DBGET
integrated database retrieval system