Sugiyamaella lignohabitans: AWJ20_3429 Help Entry AWJ20_3429        CDS       T05270                                  Symbol CDC39 Name (RefSeq) CCR4-NOT core subunit CDC39   KO K12604   CCR4-NOT transcription complex subunit 1 Organism slb  Sugiyamaella lignohabitans Pathway slb03018   RNA degradation Brite KEGG Orthology (KO) [BR:slb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     AWJ20_3429 (CDC39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:slb03019]     AWJ20_3429 (CDC39) Messenger RNA biogenesis [BR:slb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      AWJ20_3429 (CDC39)   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      AWJ20_3429 (CDC39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 ARM_Cnot1 CNOT1_HEAT NOT1_connector Motif Other DBs NCBI-GeneID:  30035450 NCBI-ProteinID:  XP_018738262 UniProt:  A0A167FWD5 LinkDB All DBs Position B:4194196..4200171 Genome browser AA seq 1991 aa AA seqDB search MDSSLVDIVQPSIRDGHLDRAKLKSLIESKKVSTTSQSISGLLAAVAGHNEWPGLEIGQA IADADTGAVESLDWEAVFALLEQPPSAPPSSSQKNLELRISSPVSLTNVVAAIGGLSGPF TKNNEENKAVATFFGRKWSILQNQVDILVHASDQQKHLNLSVYGLRKVIEASDFAQSPPH VQSIANNLESHPLNYRHLIVLSLDAICREEDPAVASARSFLDRFAKAIPEIFFLGGITIP KPWHPLLDRVIGNFFELFFAGHASRQLVFVQLAKVDKNFFFDSLVEIFERDSGMINHILS LAQDAEILEELLYLNHYNFGLELATQADKQNLVLFDTFLKKSLEKIRAIGSNSSDPPEYP FVISLLDFLEAKATVEYTQPQVAGSPPTGLNLRSVAAALNFVSSVEIPADRIEKLKAIQI QCLQSYPKLINFGQGHDDAILAHGDINSFPPEVEREMKLYYQKMYEQKIEIRDIITMLQR LKKSDDPLDQDVFACMVHSLFDEYRFFPEYPLSALATTAVLFGSLVYFQLIEGLPLSIAL RFILESLKQPTDSNMFRFGLQALFEFRQRLHEFPKYCTILLDIPGLVSQQQFYQQIKDIV DRGQNAEVASQNHQLEETELGPGDFRSVSAVVPIDNSHQEEPSEGVSDKVLFIVNNIAQN NVASKSNELASLLERRYYAWFASYIVGQRSKQEPNYHALYIDMLRHIGNRELELHCLKIT YFHITQLLNSPDTISSSDKRTQLKNLGHWLGSMTLARDRPILHKNVAFKKLLIEGYDLGK LAVVLPFVCKTLERASSSTVFLPPNPWLMGLMHVLSELYQYAELKLNLKFEIEVLCNQLD LDINTVVASTIVRNRPSETELHDAQSANLAQELDSLRIQGNEHLGPVTGVANLPRPNLNL PNNGNTSNMENELSVYSSIINQLALVGNTGFVTHPTLKQIFSLAIDKSIREVLPHVVERS STIASLAARELITKDFALEEDEQKLRIAAKNVVRVLAGSISLVTCKEPVRETLVTNLRSM MVSNGYADYTVLLEQVVLAVNDNVDIICSIVEDAAVEKSYAQIEEVLGQAYFSRKRHRES HTNQPFVDPQLNSRYPLQLPDPFRLKPGGLLPQQFAIYENFGKYRPAVEYGVDTRQAPDT RQSIQVQNQSQQTQVLLDESPYPGNASLKGQAVMAPNGTSPALFDQLIMQIQNAIDSLEK LIKESSEVSITQLTPDHRISVLISQILTVTSRSSFRDDIILKTSQMTVSTLFMLTDSQLG REVLCFLLDKLCQMSSATAKEVVLWLIYSDDERKYNVAVMVTLIKAKLITVSEIDANLAK QVLAKIPSAISFAAGLIKEVVLSNDPICLRTDFTGSLEALEVLAKEEPPNSIAVDLLNCL EEAKPKSILKEQQPAEVSEKSDEDNGKDEANKGASAISLKEQMGYIFAEWSRLAQHPSST ERSLHIFVYELSKQGILNDSELLYTLIRSAVEISVDSYKKSTGSEAFLAVDSLAKLFVTI IETSKKMEMSRRVEYAKIITSVILLNLAADHETELENFNGRPYFRLFSTLLYELTELKED SEEFKHEVHLLIADALNSLQPLAFPGFSFAWMTLISHRFFLPKLMEIPGKKGWAYLANLL GALVKFEGCYIEGKDFPEPIAVMYKGTLRIFLVLLHDHPEFLIENHYSLCNSIPLNFVQL RNLVLSAFPENIQLPDPLTQGLKVDKLPEIKESPILAIDPELDLQKFGLKKLIGAYLKNP SQALAKALAGGFKTKASHEVGLGFNSVSTNYPALNALVLYLGVQAVRSNQETAGSGKIKA KNDKSDKLIGGDDDTAHFNRDSAHLQLLAQLMKELDTEGRYFLCEAIANQLRYPNAHTHF FSCVILSLFGNYGTQALGDDKQTVQHLITRVLLERIICNRPHPWGLMITFTELLKNSNYK FWDLPFTRITPEVSINEKEANSRKGLKNCTNMLIQIERMFASLYSHISNSNSNNSPNTTG VPIVSETIVEG NT seq 5976 nt NT seq  +upstreamnt  +downstreamnt atggactcatctttggtggacattgttcaaccgagcatcagagatggccacctggacagg gccaagctcaaatccttgattgaatcaaagaaagtaagcactactagtcagtctatttca ggattattagccgcagtggcaggtcacaatgaatggccaggtctagaaattggccaagca attgcagatgccgatactggagccgtagaatcgttggactgggaagcagtgtttgcatta ttagagcagccgccctctgccccaccatcatcatcacaaaaaaatttagaactgagaatt tccagccctgtgtcgttgactaatgttgttgcggcaatcggtggtttatccggacccttc acaaaaaacaacgaggaaaataaagcagtagcaacatttttcggaaggaagtggtccatt ttgcaaaaccaagtggatatcttggtacatgcaagtgatcaacaaaagcatctcaatttg tcagtatatggcttgaggaaggtcattgaggccagtgattttgctcagtcgccgcctcat gtccagtcaattgcgaacaatttggagagtcatccattgaattataggcatcttattgtt ctgtctttagatgcgatttgcagggaggaagatcctgctgttgcctcagctaggtcattt cttgacaggtttgccaaggctattcctgaaatttttttcttaggtggtattactattccg aagccgtggcatccgttattagatcgtgttattggaaatttctttgaactttttttcgct ggccacgcctcccgtcaacttgtgtttgtccagcttgcaaaggttgacaagaactttttc tttgattcattagttgaaatattcgagcgcgactcaggcatgatcaatcatattctttct ttagcacaggatgcagaaattttagaggagttgctttatttgaaccactataattttggt ttagagctagctacccaggcagacaaacaaaatcttgttctatttgatacatttttgaag aagtctctagaaaaaatacgtgcaataggatctaattcctctgacccacctgagtatcca tttgtaatttctctattagactttctggaagctaaggctactgttgaatatactcagcct caagtagcagggagtccacctacaggtctcaatttgagatcagtggctgctgccttaaac tttgtttcaagcgtagagattcctgcagacagaatagagaaattgaaggctattcaaatc caatgcctgcagtcatatcccaagcttattaattttggccagggtcacgatgacgctatt ctggcacatggtgatattaattcattcccaccggaagttgaaagagaaatgaagctctat tatcaaaaaatgtatgaacaaaagatcgagattcgtgatattattaccatgcttcaaaga ctgaagaagtcagacgacccattggaccaagatgtttttgcttgcatggtccattcatta tttgatgaatatcgttttttcccggaatatccgttgagcgctttggctaccactgcagtt ttatttggctcacttgtatactttcaactaattgagggccttcccttgtctattgcattg agatttattttggaatctctcaagcagcctacggactccaacatgtttaggtttggatta caagcgttgtttgagtttagacaaagactacatgaatttcccaaatattgcacgatttta cttgatatccctggtttagtttctcagcagcaattttatcagcagatcaaagatatagtt gataggggtcagaatgcagaggtcgctagccagaatcatcaattagaagaaactgagctt ggacctggtgactttagatctgtgagtgcagtagttcccattgacaactcgcaccaagaa gaaccctctgagggagtaagcgataaagtactcttcattgtgaataatattgctcagaac aatgtggcttccaaatcaaacgaactcgctagtctcttggaacgccggtattatgcttgg tttgcgtcttacatagtcggacagcgatcgaagcaagagcctaattaccatgccttatac atagatatgctgcgtcatatcggcaacagggagttagagttgcactgtctgaagataaca tactttcatatcacccagctactcaattctcccgatactatttcatcatcggacaagcgt actcaactcaaaaaccttggtcactggttgggtagtatgacgttagcccgggatcgtcct attctccataaaaatgttgcgttcaagaagcttttgattgaaggatatgatttgggaaaa ctagctgttgtcttgccattcgtatgcaaaacattggagcgagcttcttcttcgacggta tttctacctccaaatccttggctaatggggctaatgcacgttctttcggagctctatcaa tatgctgaattaaagctgaacttgaagtttgagattgaagttctctgcaatcaactggat ctggacattaatactgttgttgcttccaccatcgttcgcaacaggcctagcgagaccgaa ctccatgatgctcaaagtgcgaacttggctcaagaattggacagcttacgaattcaggga aatgagcatttgggtcctgttactggggttgctaacttaccaagaccgaatctcaatctc ccgaataatggaaatactagtaatatggagaacgaactctctgtttattcttctattatt aatcagcttgcgcttgttggtaacacaggattcgttactcatccaacattgaaacagata ttttcgcttgcgattgacaagtctattagggaagttcttccacacgttgtcgaaaggtcg tccacgattgcttctttggcggcccgtgagttgatcacgaaagattttgctttagaagaa gatgagcaaaagcttcgtattgccgcgaagaacgttgttcgcgttttagctgggagcata tctttggttacctgtaaggaacctgttcgtgaaacacttgtaacaaatctccgcagcatg atggtctccaatggttatgctgattacactgttttgttagaacaggttgttttggcagta aatgacaatgtcgacataatctgttctattgttgaggatgctgctgtggagaaatcgtat gctcagattgaagaggtattgggtcaggcctatttcagtcgaaaacgccatcgtgagtca cataccaatcaaccttttgttgaccctcaacttaattcaagatatccattacagttgcct gatcccttccgccttaaacctggtgggctccttccccaacagttcgctatatatgaaaac tttggaaaatacagacctgctgttgagtatggtgttgatacacggcaagcccctgacaca agacagtcaatacaggttcaaaaccaaagtcaacaaactcaagttttgcttgacgagtct ccatatcctggaaatgcctctttaaagggacaggctgttatggcccccaatggaacttca ccagctttgtttgaccaattgattatgcaaattcagaatgcaattgattctttagaaaag cttatcaaggaatccagtgaagtttcaatcactcaattgacacctgatcatagaatttca gttctgatatcccaaatcctcacagtcaccagtcgcagctcgtttagagatgatattatt ttgaaaacatctcaaatgactgtcagtacgttatttatgttaacagattcccaattggga agagaggttttatgcttcttacttgacaagctttgtcaaatgtcatcagctactgcgaag gaagttgttctctggcttatttattcagatgacgaaagaaagtataacgttgctgtgatg gttacgttaatcaaggctaagcttatcactgtaagtgaaatcgatgcgaatctcgccaaa caagtcttggcgaaaatcccatcggctatatcttttgccgctggcttgatcaaagaagtt gtactatctaatgatccaatatgcttgagaaccgattttactggaagtctggaagcatta gaggtactagcgaaggaagaaccaccaaacagtattgccgtggatttgttgaactgttta gaggaagcaaagcctaaaagcatcttgaaagaacaacagccagccgaagtctcagaaaaa tctgacgaggataatggcaaagatgaagcaaataagggtgctagcgctatatcgctcaag gagcagatgggatacatttttgctgaatggtcgagattggcccaacaccccagtagcact gagagatctcttcatatttttgtctacgagctatcgaaacagggaattttgaacgatagc gagttgctgtacacattgattagatctgctgttgaaatttctgttgatagctataaaaag tctactggttctgaagcgtttttggccgtggactctctagcaaaacttttcgtgacaatt atagagacgagtaagaagatggagatgagtcgtagagtagaatatgctaagattatcaca tcagttattcttctcaatcttgctgctgatcatgaaactgaattggaaaattttaatggg agaccatatttcagattattttcgaccctactttatgaactaactgaactaaaagaggat tcggaggagtttaagcatgaagtccacctgctgattgcggatgcacttaatagcttacag ccattagcatttccaggattcagctttgcatggatgactctcatatcacaccgattcttt ttgccaaagttgatggagattcctggtaaaaaagggtgggcgtaccttgcaaatctttta ggagctcttgttaaatttgaaggctgttatattgagggaaaagattttccagagcctatt gctgtcatgtacaagggcacacttagaatattcctggttcttcttcatgatcacccggaa ttcttgattgaaaaccactacagcttgtgtaacagtattcccctgaactttgtgcagttg aggaatttggtactctctgcatttccagaaaatattcagctaccagatcctctaactcaa gggttaaaggttgataagctaccagagataaaggagtcccctatacttgccattgaccca gaattagatttacagaagtttggtctcaaaaagcttattggtgcttatttaaaaaaccca tctcaagcattagcaaaggcccttgcaggaggcttcaagactaaggcgagccatgaggtt ggactagggttcaattcagtttctacgaactaccctgctttgaatgccttggttttatat ctaggagttcaagctgttcggagcaaccaagaaacagctggctcgggaaagattaaggcc aaaaatgataaaagtgacaagcttattggcggcgacgatgacacagcacacttcaatcgt gactcagcgcatttgcaactactagcacaactaatgaaagaattggacacagagggaagg tatttcttatgcgaggccattgctaatcaattgagatacccaaatgcccatactcatttt ttcagttgtgttattctctccttatttggaaattatggaacccaggctctgggagatgat aaacagactgtccaacatttgattacgcgtgtccttcttgagcgtattatttgcaatcga ccccacccttggggcttgatgatcacattcactgaattattgaaaaattcaaactataaa ttctgggatcttccgtttaccagaattaccccagaggtaagtattaatgagaaagaggcg aactcaaggaaaggtctgaagaactgcactaacatgctgatacagattgaacggatgttt gcatcgctgtatagccatattagcaattccaactcgaacaacagcccaaatactactggt gtcccaatagtatcggaaactatagttgagggctaa

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