Sugiyamaella lignohabitans: AWJ20_4122
Help
Entry
AWJ20_4122 CDS
T05270
Symbol
CLF1
Name
(RefSeq) Clf1p
KO
K12869
crooked neck
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_4122 (CLF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_4122 (CLF1)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_4122 (CLF1)
Spliceosome [BR:
slb03041
]
Complex B
Other components
Prp19-related factors
AWJ20_4122 (CLF1)
Complex C
AWJ20_4122 (CLF1)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
AWJ20_4122 (CLF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT
Suf
TPR_19
TPR_6
TPR_16
HAT_Syf1_M
TPR_17
TPR_CcmH_CycH
U3_assoc_6
Mad3_BUB1_I
Virulence_fact
Iml2-TPR_39
IQCJ-SCHIP1
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
30036220
NCBI-ProteinID:
XP_018733795
UniProt:
A0A161HJ29
LinkDB
All DBs
Position
C:1354688..1356763
Genome browser
AA seq
691 aa
AA seq
DB search
MNSERTARVKNKAVAPLQITAEQILLEAFERRDDGLKVPEQRITDSEELKEYQGRKRKEY
EEALRRNRLNFGQWMRYAQWEIDQREMERARSVFERALDVDSTNVPLWIRYIQCELKERN
INHARNLLDRAVTILPRVDKLWFNYVSVEEMLSNIPGCRQVFERWMAWRPNPPAWNAYIN
LEKRYGEYDRARDIFERFTAAYPQSENWIKWARFEEEVGTAENVRDVYTLAVDTILAIGG
EEFLDEKILANWAKWEARQKEWERARAIYKFGLERLSKSKSENLYNSYTAFEKQYGDKDG
IDDVILSKRRIKYEDQVTSDPFDYDAWFSYLTLMEETSSDDVDSVRDVYERAIANVPQIE
EKRYWRRYIFLWIRYAVYEELTNNDVERTREIYNQCIKTIPHKKFSFDKIWLLYAKFEIR
QGNLQRARKILGQGLGLSGKPKIYKGYIELEKELKEFDRCRKLYEKFLENYPDLPLGWIE
YATLEQQLGDDDRARAIYELAIEQPEMEMPELVWKRYIEFETEVGEYDRARKLFETLVEK
TNHVKVWCSYATFELSVPGEDSDDEDHAGYNEDDEDEEREIVVTEEAKERARKIFQRAWN
RFKQTDQKEDRVVLNNTWIEFEKTYGTPETLSTVEKQAPSMVKKRRRLPDGSFEEYFDYV
FPTDEDNSMAKLLEAARKFKERQAAAASSSV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgagagaacggcgcgggtcaaaaacaaggcagttgctccgctgcagattacg
gcggagcagattctgctggaggcttttgagcgccgagatgacggtcttaaggtgccagag
cagcggatcactgactcggaggagctgaaagagtatcaggggagaaagcgaaaagaatat
gaagaggcgttacgtcgaaacagactgaattttggccagtggatgcgatatgctcaatgg
gaaatcgaccagcgagaaatggaaagagctagatcagtttttgaaagagctctggatgta
gattcgactaatgttccgctgtggatcagatatattcagtgtgaattgaaagaacgaaat
atcaaccatgcccgaaatctgttagatcgagcagtgacgattctaccgcgagtcgataaa
ctgtggtttaattatgtttcagttgaagaaatgctgtctaatattccagggtgtagacag
gtgtttgaacgatggatggcctggagacccaatcctccagcctggaatgcatatattaat
ctggaaaaaagatatggtgaatacgatagagccagagacatctttgaacggttcacggcc
gcttatccacagtcggaaaactggatcaaatgggctcgatttgaagaagaagtgggcacg
gctgagaatgtccgcgatgtatatacactggcagtggatactatcttggctattggagga
gaagagtttttagatgagaagattcttgctaactgggctaaatgggaagctcgtcagaaa
gagtgggagcgagccagagctatttataagtttggactcgagagactgtccaagagtaag
agtgaaaacttatacaattcatacacagcatttgaaaaacagtatggtgataaagatggt
attgacgatgtgatcttatcgaaacgacggataaagtacgaagatcaagtgactagcgat
ccgttcgactatgatgcatggttctcatacttgaccctgatggaagaaacgagcagtgac
gatgtagacagtgtgcgagatgtgtacgaacgagctatcgccaatgttcctcaaatcgaa
gaaaaacggtactggcgaagatacattttcttatggatacgatatgctgtttatgaagaa
ctgactaataatgatgtcgagagaactcgagaaatatacaaccaatgcatcaagaccatc
ccacataagaagttctcgttcgacaagatctggcttctgtatgcgaaattcgagattcgt
caaggaaatctacaacgagccaggaaaatcctcggtcaaggattgggactttctggtaaa
cccaagatctataaaggatatatcgaacttgagaaggagttgaaggagtttgacagatgt
cgcaagttgtatgaaaagtttcttgaaaactatccggacctgccgcttggatggatcgag
tatgccacacttgaacagcaacttggagatgatgacagagcacgagctatttacgaacta
gccattgagcaacctgagatggagatgcctgaactggtatggaagcggtatattgagttt
gaaaccgaggttggcgagtatgatcgagcaagaaaactgtttgaaacacttgtggagaaa
acgaaccacgtcaaagtatggtgctcctacgctacatttgaactttctgttcctggagaa
gacagcgatgacgaagaccatgccggatacaatgaagacgacgaagacgaggagcgagaa
atcgtggtcaccgaagaagccaaagaaagagcacgtaaaatctttcaaagagcatggaac
cgcttcaaacaaacagaccaaaaagaagaccgtgtggtgctcaacaatacatggatcgag
ttcgagaaaacgtatggcacgcccgaaactctctcgacagtcgaaaaacaagcaccatcc
atggtcaaaaagcgacgccgtctgcccgacgggtcgttcgaagaatatttcgactacgtc
ttcccgaccgacgaagacaacagcatggccaaactactcgaagcagcccgcaaattcaaa
gagcgccaggccgccgctgcctcctcttctgtataa
DBGET
integrated database retrieval system
