KEGG   Sugiyamaella lignohabitans: AWJ20_475
Entry
AWJ20_475         CDS       T05270                                 
Symbol
RAD4
Name
(RefSeq) Rad4p
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AWJ20_475 (RAD4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slb03400]
    AWJ20_475 (RAD4)
DNA repair and recombination proteins [BR:slb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      AWJ20_475 (RAD4)
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_2 BHD_1
Other DBs
NCBI-GeneID: 30036915
NCBI-ProteinID: XP_018734703
UniProt: A0A167CXH3
LinkDB
Position
A:1508296..1510590
AA seq 764 aa
MAKRRQTVSAVETKSKRIKPESPAPAATVVDNEQALERMLSPSSDGNSSASESSRSEHNG
VWGSAPAAGGKGDPPEDSSSDEDSDDDIDWADVDLQQGEVPELKVAEKIEISTKIDPQPE
EDPVSAEREERRRKVEAANREKVIRLTTHVLHVQALLHHGSVRNEWINDSKLQKTLKEKL
PKPLRSAFRKHAKHVDSGKNIRKPDEVIDNLAVLVTKLALYFRKQFEITKPGLTVHGYYQ
QGDNTDGSTGALDSEEFILKCSEREQFTDFEDFYNTAVTLKGSRDLGAQVFACILRSLGV
ETRLVFSPPLLGYSLHKREQFVPDKDGRKRKTGSSRKSMSRGATPDDVGEHQRVIDSNLA
YPIFWCEIYDPRLQSYIAIDPMILPFPDYEDLLNGKYAAEKPAQFEPQGPYAGSQKMYYV
VAYEDDSNCRDLTPKYMSSKTVPQIITLTATSLVRPMAASSFKDVAYLLYLRSVWLMARA
LNKKSDKLRAEDAQMRKWIAAKSSTENGSESTEPSYPNVLSAYKSHPTLVLHSKLYKSQT
LRPGAKPVHKFDIKSAKGTRTEIVYHQKDVVNCRPQAAWYKEGRVIKPGEKPMIIEKAKP
STRNGKRKLETSIKYGDNPEVVEQGLYSYEQTMEYVPPEVIEGQPIPRNEFGRVEIFTPN
MVPKGTVHLRYQGLGRIAKKLGIDFVPAVVGFKFQSRFAKPDIDGGIVPVNSAEILLDAW
RQDQETKREKETAARNEDALTRWKLYVARLQLLRRLENKYGRTS
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggccaaacgacgtcaaacggtatcggctgtcgagacaaagagcaaacgaataaagcca
gagagcccggcacctgctgcaacagtcgtcgacaatgagcaggcgctcgagcggatgctg
agcccgtcctcagacggcaactcgtccgcctcagaaagctcgcgaagcgagcacaacggg
gtctggggcagtgccccagccgccggaggcaaaggcgaccccccagaagactccagcagt
gacgaagacagcgacgacgatattgattgggcggatgtggacctgcaacagggagaagtt
ccggagctgaaggtggctgagaagatcgaaatttcgaccaagattgatccccagcccgaa
gaagatccagtttcagcagagagagaagaaaggaggagaaaagtcgaggcagcgaatcgg
gaaaaggttattcgtttgacgactcatgtgcttcatgttcaggctttgctgcatcatggg
tcagtgaggaacgagtggataaacgattctaaattgcagaaaacattaaaagagaaactt
ccaaaaccgctgaggtcggcatttagaaagcatgctaaacacgttgatagcggtaagaat
attcgcaaaccggacgaggttatcgataacttggcagtgctggtgacgaagctggcgttg
tatttccgcaaacagttcgagattacgaaaccaggactgactgtgcacggatactatcag
cagggagataatactgatggtagtacaggagctctggattcagaagaatttattttgaaa
tgttcagaacgagaacagttcactgattttgaagatttttataatacagctgtgacttta
aaagggtctagagatctcggggcacaggtgtttgcatgtattttacgcagtctgggtgtc
gaaacgagattggtattttcacctccattgctggggtattcacttcataaacgagaacaa
tttgttcctgataaagacggtagaaagagaaagacgggttctagtagaaaaagcatgagt
cgaggtgcgacgccagacgatgttggagaacaccagagggtcatagacagcaatctggcg
tatcccattttctggtgtgaaatatacgatcctcggctgcagagttatattgccatagat
ccaatgattctgccgtttccggattatgaagatttgttaaacggcaaatatgctgctgag
aagcctgcacagtttgaaccacagggtccatatgctggaagtcagaagatgtattatgtt
gttgcgtacgaagacgattcaaactgtcgtgatctgactcctaaatatatgagcagcaag
acagttccacaaatcatcactcttacagccacgtctctggtacgacccatggcagcgtcc
tcgtttaaagacgtcgcatacctactttatctgcgttcagtctggctcatggctcgagct
ctgaacaagaaatcagataaactgcgagctgaagacgctcaaatgagaaaatggatagca
gcgaaatcgagtaccgaaaacggcagtgagtcaactgaacccagttatcccaacgttctc
tcagcttataaatcacatccgacgctagtgctccacagcaaactgtacaaaagccagaca
ttacgacctggagcaaaacccgttcataaattcgacattaaaagtgccaaaggcacacga
actgaaattgtatatcatcaaaaagatgttgtaaactgccgacctcaagcagcctggtat
aaagagggccgagttatcaagccaggagaaaagcctatgattatagaaaaagccaagccg
tctacaagaaacggcaagagaaaactagaaacgagcatcaaatacggggataaccctgaa
gttgtcgagcaaggactgtattcatacgaacaaacgatggaatacgtcccaccagaagtg
atcgaaggacaacccattccgcgaaacgagttcggccgggtcgaaatctttaccccgaac
atggtccccaaaggaacagtgcatcttcggtaccagggactcggacgcatcgccaaaaag
ctcggcattgattttgtacctgccgttgtcgggttcaaattccagtcccggtttgccaaa
cccgacatcgacggaggtatcgtccccgtcaactctgccgaaatccttctcgacgcctgg
cgtcaggaccaagaaaccaaacgcgaaaaagaaaccgctgctcgcaacgaagacgcactc
acccgctggaaactctacgtcgcacgtctccaactgcttcgccgtctcgaaaacaagtac
ggacgaacctcttaa

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