Streptomyces lydicus 103: SL103_12160
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Entry
SL103_12160 CDS
T04699
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SL103_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_12160
Enzymes [BR:
slc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SL103_12160
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SL103_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AOP46903
UniProt:
A0A1D7VJH0
LinkDB
All DBs
Position
2805897..2808041
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AA seq
714 aa
AA seq
DB search
MSRENGRSEVGVGASGAGEQLALIRDAVREKKADRAKPRTWRGAELAAELPVARVLVDKG
LVHLDRYFDYAVPAAMDAEAQPGVRVRVRFGAGEKGGRREGGKLVSGFIVERVAESEYRG
VLAPLAQVLSPERVLSPELLGLCRAVADRYAGTLADVVQLAVPPRRARAEAKPSPPLLAP
NAPPEVGSWARYGAGPGFLAALTRGDAPRAVWTALPGATWPQELARAAAAALAGGRGALV
VVPDGRAAARVDEALGELIGEGRHVLLTADAGPEERYRRWLAVSRGSVRAVIGTRAAMFA
PVADLGLVALWDDGDSSHSDPHAPQPHAREVLIQRSAGERAGFLLGGLSCTVEAAQLVET
GWARPLTAEREQVRTAAPLVRTIGEGDEARDAAARAARLPSMAWQVVRDGLTRGPVLVQV
PRRGYAPRLACERCRTPARCRACAGPLEAQEAGALACAWCGRAEPDWHCAECGGARLRAQ
IVGARRTAEELGRAFPAVPVRTSGRDHVLTTVPGAPALVVSTPGAEPVAEGGGYAAALLL
DGWALLGRPDLRAGEEALRRWLGAAALVRRQAEGGTVAVIAEPTLRPVQALVRWDPVGHA
VRELAERAELGFPPVSRMASVAGRGEDVAELLRTAELPPGAEVLGPVPLPVPDPGRPRRP
GDPPPGEAWERALVRVRPGQGAALAAALKAARAARLVKREGEAVRVRIDPPDLG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagggagaacgggcggtcggaggtgggtgtgggggcgtcgggggcgggagagcag
ctggcgctgatccgggatgccgtgcgggagaagaaggccgaccgggccaagccgcggacc
tggcggggcgccgagctggcggccgagctgccggtggcgcgggtgctggtggacaagggc
ctggtgcacctcgaccggtacttcgactacgcggtgccggcggccatggacgccgaggcg
cagcccggtgtgcgggtgcgggtgcggttcggtgcgggggagaaggggggccggcgcgag
ggcggcaagctggtcagcggcttcatcgtcgagcgggtggcggagagcgagtaccgcggg
gtgctggcgcccctcgcgcaagtactgtcgccggagcgggtgctgtcgccggagctgctg
gggctgtgccgggcggtggcggaccggtatgcggggacgctggccgatgtggtgcagctg
gcggtgccgccccggcgggcgcgcgccgaggccaagccctcaccgcccctgctggcgccc
aacgccccgccggaagtgggaagttgggcgcgctacggcgcggggcccgggttccttgcg
gcgctgacgcggggggacgcgccgcgggcggtgtggacggcgctgccgggggcgacctgg
ccgcaggagctggcgcgggcggcggccgcggcgctggccggcgggcgcggcgcgctggtg
gtggtgcccgacgggcgggccgcggcgcgggtcgacgaggcgctcggcgagctgatcggg
gagggccggcacgtactgctgaccgccgacgccgggcccgaggagcgctaccgccgctgg
ctggcggtgagccggggctcggtgcgcgccgtgatcgggacgcgagcggcgatgttcgcg
ccggtcgccgacctcgggctggtggcgctgtgggacgacggtgactccagccacagcgat
ccgcacgcgccgcagccgcatgcccgggaagtgctcatccagcggtcggccggcgagcgg
gccggcttcctgttgggcggactgagctgcacggtcgaggccgcgcagctggtggagacc
ggctgggcgcggccgttgaccgcggagcgcgagcaggtccggaccgcggcgccgctggta
cggacgatcggtgagggtgacgaggcgcgggacgccgcggcccgggccgcccggttgccg
agcatggcctggcaggtggtgcgcgacgggctcacccgagggccggtgctggtgcaggtg
ccgcgccgcgggtacgcgccccggctcgcgtgcgagcggtgccgcaccccggcccgctgc
cgggcctgtgccggaccgctggaggcccaggaggccggcgcgctcgcctgcgcgtggtgc
gggcgggcggagcccgactggcactgcgcggagtgcgggggcgcgcggctgcgggcccag
atcgtcggggcgcggcggacggcggaggagctggggcgggcgttccccgcggtccccgtg
cgcacgtcggggcgcgaccacgtgctgacgacggtgccgggggcgccggcgctggtggtg
agcacgcccggcgcggagccggtggccgaggggggcggctatgccgccgcgctgctgctg
gacggctgggcgctgctggggcggccggatctgcgcgccggggaggaggcgctgcgccgc
tggctgggcgccgccgcgctggtgcgccgccaggcggagggcggcacggtcgcggtgatc
gcggagcccacgctgcggccggtgcaggccctggtgcgctgggacccggtgggccatgcg
gtccgcgagctcgccgagcgggccgagctgggcttccctccggtgtcccggatggcttcg
gtggcgggccgcggcgaggacgtggcggagctgctgcgcacggccgaactcccgccgggc
gccgaggtgttggggccggtcccgctgccggtgccggaccccgggcggccgcgccggccg
ggtgatcccccgccgggggaggcgtgggagcgggcgctcgtacgggtccgtccggggcag
ggcgcggcgctcgccgcggcgctcaaggcggcacgggcggcgcggctggtcaaacgggag
ggcgaggcggtacgggtacggatcgatccgccggacctggggtga
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