Staphylococcus lugdunensis HKU09-01: SLGD_01354
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Entry
SLGD_01354 CDS
T01177
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
slg
Staphylococcus lugdunensis HKU09-01
Pathway
slg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SLGD_01354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slg03021
]
SLGD_01354
Transcription machinery [BR:
slg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLGD_01354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
ADC87445
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All DBs
Position
1394455..1395561
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AA seq
368 aa
AA seq
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MSDNKVKIKKQTIDPTLTLEDVKKQLLEKGKKEGHLSHEEIAEKMQNFDMDTDQMDEFFD
QLNDNDISLVNEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLNAQEEIEL
AKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacaaagtaaaaattaaaaagcaaacaattgatcctactttaactttagaa
gatgtaaaaaaacaattgcttgaaaaaggtaaaaaagaaggccatttgagccatgaagaa
attgcagaaaaaatgcaaaacttcgatatggacaccgatcaaatggatgaattttttgat
caattgaatgataatgacatttcactagtaaacgaaaaagatagttcagataccgatgaa
aaacttaatccaaatgatttaagtgcacctccaggcgttaaaataaatgatcctgtccgc
atgtacttaaaagaaattggacgtgttaaccttcttaatgcacaagaagaaattgaatta
gcaaaacgtattgagcaaggcgatgaaattgctaaatcacgtttagctgaagcaaactta
agacttgtggtaagcatagctaaaagatatgtaggacgaggcatgttattccttgactta
attcaagaaggcaacatgggactaattaaagctgtggagaagtttgacttcaataaaggg
tttaaattctcaacttatgcaacgtggtggattagacaagcaattactcgtgcaattgct
gaccaagcacgtacaattcgtatcccagtgcatatggtagaaacgattaataaattaatc
cgcgttcaacgtcaattacttcaagatttaggacgagatcctgcacctgaagaaattggt
gaagaaatggacctacctcctgaaaaagttcgagaaatactaaaaattgctcaagaacca
gtgtctttagaaacgccaatcggtgaagaagatgatagtcatcttggtgattttattgaa
gaccaagaagctcaaagtccttctgaccatgcagcttatgaattgctcaaggaacagctc
gaagatgtgttggatacattaactgatagagaagaaaatgtattgcgcttaagattcggt
ttagacgatggacgaacacgcactttagaagaagttggtaaagtatttggtgtaacaaga
gaacgtattcgtcaaatagaggcaaaagctttgagaaaacttagacatccaagtcgaagc
aaacgcttaaaagactttatggactaa
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