Streptomyces liangshanensis: HA039_10810
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Entry
HA039_10810 CDS
T07519
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slia03021
]
HA039_10810
Transcription machinery [BR:
slia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HA039_10810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
HTH_10
HTH_AsnC-type
HTH_3
HTH_Crp_2
MarR
Sigma70_ECF
IF2_N
HTH_28
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QIQ02744
UniProt:
A0A6G9GX08
LinkDB
All DBs
Position
2553787..2554806
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AA seq
339 aa
AA seq
DB search
MTNGEGPVRDEGRIPREARPEGSRPAGPRGGHGAPVEPLLAPAGIPEQQARPHPEDGLDG
QKAAAEQAQAERAATMSEQQHTEHKQHDPHDRSGARLMFVTLRELPDGSPEKADLRNQLV
RMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIK
RHFRDKGWAVRVPRRLQELRLSLTTATAELSQQHGRSPTVHELAERLGISEEEVLEGLES
ANAYSTLSLDVPDTDDESPAVADTLGSEDEALEGVEYRESLKPLLEDLPPREKRILLLRF
FGNMTQSQIAQEVGISQMHVSRLLARTLAQLRERLLVEE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacggggaagggccggtgcgtgacgaggggcgcatcccacgggaggcgcggccg
gaaggatcccggccggcgggaccgcgaggagggcacggggctccggtggagcccctgctc
gcccccgcgggcatcccggagcagcaggcccgtccccacccggaggacgggcttgacggc
cagaaggccgcggcggagcaggcgcaggcagagcgggcggccactatgagcgagcaacag
cacaccgagcacaagcagcacgatccacacgaccgcagcggtgcgcggctgatgttcgtc
acgctgcgggagctgccggacgggtcgccggagaaggcggacctgcggaaccagctggtg
cggatgcacctgccgctggtggagcacctggcgcggcggttccgcaatcgcggggagccg
ctggacgacctgacgcaggtcgcgacgatcggcctgatcaagtcggtggaccggttcgac
ccggagcgcggcgtcgagttctcgacgtacgcgacgccgacggtcgtcggggagatcaag
cggcacttccgcgacaagggctgggcggtgcgggtgccgcgccggctccaggagctgcgg
ctgtcgctgacgacggcgacggcggagctgtcgcagcagcacgggcggtcgcccacggtc
cacgagttggccgagcggctgggcatctcggaggaagaggtcctggaggggctggagtcg
gcgaacgcgtactcgacgctgtcgctggacgtcccggacacggacgacgagtcgccggcg
gtggcggacacgctgggctcggaggacgaggcgctggagggcgtcgagtaccgggagtcg
ctcaagcccctgttggaggatctaccgccgcgggagaagcggattctgctgctccggttc
ttcggcaacatgacgcagtcccagatcgcgcaggaggtcggcatctcgcagatgcacgtc
tcccgcctcctggcccggacgctggcgcagctgcgcgagcgcctgctggtcgaggagtag
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