KEGG   Sodalis ligni: GTU79_00475
Entry
GTU79_00475       CDS       T08321                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K02584  Nif-specific regulatory protein
Organism
slig  Sodalis ligni
Pathway
slig02020  Two-component system
Brite
KEGG Orthology (KO) [BR:slig00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GTU79_00475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:slig03000]
    GTU79_00475
Transcription factors [BR:slig03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    GTU79_00475
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 Mg_chelatase AAA_16 AAA AAA_5 Parvo_NS1 AAA_22 AAA_7 HTH_28 TIP49
Other DBs
NCBI-ProteinID: QWA11354
LinkDB
Position
104787..105959
AA seq 390 aa
MSTQTDLVKTGEQDRISVPRFNPAPGRPVHGRSRKPHSRHEVDHIIARSPAMKNIMAILA
RIAPTRTAVLLRGEPGTGKDVIARAIHNLSPNREGPFIKVCCDYLNNEQTLLELFGCDSG
YSPGAARYPGDISLAAGGTLFISEIGHFSLALQKRLLRMLQDQLYRPLGSTETLPSDVRI
ICATEKNLEAMMVRGEFLPELYYRIHIATVNLPPLRDRKEDIPALAAYFFERYNRVNGLR
LSITEAALAPLYVCHWPGNVRDLENCLEHAALLAADDVIRQLPCLAGRCFRQRLNQKISR
QEEVPPAHESNDGVLAPAAAWRPVTPAGQGTLSPPAHDAALVDEDDPRNRLISALEKSGG
VKAKAARLLNITPRQLYYALKKLQIEVKKF
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgagtacacagaccgatctcgttaaaaccggcgagcaggaccggatatccgtcccgcga
ttcaatcccgccccgggccggccggtccacggccggtcccgcaagccccactccaggcac
gaggtggaccacatcatcgcacgctcccccgccatgaaaaatatcatggcgatcctcgcg
cgcatagcgccgacccgcacggcggtgctgctgcgcggcgagcccggcaccggcaaggac
gtcattgcccgggcgatacataatctgtcgccgaaccgcgaagggccttttatcaaagtc
tgctgcgactaccttaataatgaacagaccctgctggagctgttcggctgcgattccggc
tattctcccggcgccgcccgctaccccggcgatatctccctggcggcgggcggcacgctg
tttatcagcgaaatcggccatttttccctggcgttgcaaaaaaggctgctgcgaatgttg
caggaccagctctatcggcccttggggagcaccgaaaccttgccaagcgacgtgcggatt
atctgcgccacggaaaaaaacctggaagcaatgatggtgcggggggaatttttgccggag
ctctattaccggatccatatcgccaccgttaacctgccgccgctgcgggacagaaaagaa
gacatccccgccctggcggcctatttttttgaacgctacaaccgggttaacggcctgcgg
ctctccatcaccgaggcggcgttggcgccgctgtatgtatgccactggcccggtaatgtc
cgggatctggagaattgcctggaacatgccgccctgttggccgcagacgatgtaatccgc
caactgccctgcctggcgggacggtgctttcgccagcggctgaaccagaaaatcagccgg
caggaagaggtaccgccggcccatgaaagcaacgacggcgttcttgcaccggcggccgcc
tggcggcccgtaacccccgcaggccaaggcaccctatcccccccggcccacgacgccgcc
ttagtggacgaggacgacccccgtaaccggttaatcagcgcgctggaaaaaagcggcggc
gtcaaagccaaagcggcccggttgcttaacatcacaccccgccagctctattacgccctc
aaaaaactgcaaatagaagtcaagaaattctag

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