Shewanella litorisediminis: JQC75_04210
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Entry
JQC75_04210 CDS
T07182
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
slit
Shewanella litorisediminis
Pathway
slit02024
Quorum sensing
slit03060
Protein export
slit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JQC75_04210 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JQC75_04210 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JQC75_04210 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slit02044
]
JQC75_04210 (ffh)
Enzymes [BR:
slit01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JQC75_04210 (ffh)
Secretion system [BR:
slit02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JQC75_04210 (ffh)
Eukaryotic Sec-SRP protein
JQC75_04210 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_33
DUF7890
KTI12
T2SSE
NAT10_TcmA_helicase
AAA_30
KAP_NTPase
AAA_24
AAA_14
Mg_chelatase
ABC_tran
APS_kinase
AAA_16
TsaE
AAA_31
YqeC
FliD_C
ATP_bind_1
Rad17
Thymidylate_kin
AAA_28
6PF2K
nSTAND_NTPase5
ArsA_ATPase
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QRH02634
UniProt:
A0ABX7G5T8
LinkDB
All DBs
Position
951124..952497
Genome browser
AA seq
457 aa
AA seq
DB search
MFENLTDRLSRTLKTISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAV
GQEVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVIMMAGLQGAGKTTSVAKL
SKFLRTRHKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIANAAISHAK
LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEQVERGVDKEKAMKLASKVKSGGNFDLEDFREQLQQMKNMGGMMGLLEKLPGVGQL
PPEAMAQIQDGKMTRQMEAIINSMTPGERQNPDIIKGSRKRRIAAGSGTQIQDVNRLLKQ
FTQMQKMMKKMSSKGGMQKMMRAMGGMMPGGMKLPGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctgaccgacagactgtcgcgtacgctgaagactatcagtggtcgcggt
cgcttaacggaagacaacattaaagacaccctgcgggaagtccgtatggcgctcctggag
gccgatgtggccttgccggttgtccgtgaatttgtgaatgccgttaaagagcgcgcggta
ggccaggaagtggccaagagcctgacgccaggtcaggtgtttgtcaaaatcgttcaaagt
gagcttgaaaaggcgatgggtgaggccaacgaggccctgaatctcgccgcccagcctcct
gcggtgatcatgatggcgggtctgcagggggcgggtaaaaccacctctgtggccaagctt
tccaagttcctgcgtacccgccataaaaaatcggtgttggtggtcagcgccgacgtttac
cgtcctgcagcgattaaacagctcgaaaccctggccaaagaagtggaagtggaattcttc
ccctccgatgtcagccaaaagcccatcgacattgccaatgccgcgatttcccatgctaag
ctgaaattcatcgatgtagtcatcctcgatactgcgggtcgcctgcacgtcgatgaagcc
atgatggatgagatcaaggcgctgcatgccgcggtcaagcccattgaaaccttgttcgtg
gtagacgccatgacgggtcaggatgctgccaacacggccaaggcctttaatgaggcgctg
ccgctcaccggcgtggtactgaccaaggtggacggtgatgcccgcggtggtgcggcgctg
tctatccgccacatcacaggcaagcccattaagttcctcggtgtcggcgaaaagaccgat
gcccttgagccattccaccccgaccgtgttgcctcgcgtattctcggtatgggtgacgta
ctctccctgattgagcaggttgagcgcggcgtcgataaagaaaaagccatgaagttggcc
tccaaggtcaaatcgggtggtaatttcgacctcgaagacttccgcgagcagctgcagcag
atgaaaaacatgggcggcatgatgggcctgctggaaaaattgcccggcgttggtcagctg
ccaccggaagccatggcacaaatccaggatggtaaaatgacccgccaaatggaggctatt
attaactccatgaccccgggtgagcgccagaatccggatatcatcaagggctctcgcaag
cgccgtatcgctgcgggtagtggcacacaaattcaagacgttaaccgtctacttaaacaa
ttcacccagatgcagaagatgatgaagaagatgtcttccaagggtggtatgcagaaaatg
atgcgcgccatgggcggtatgatgcccggcggcatgaagcttcccgggcgttaa
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