Shewanella litorisediminis: JQC75_16175
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Entry
JQC75_16175 CDS
T07182
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slit03032
]
JQC75_16175
03036 Chromosome and associated proteins [BR:
slit03036
]
JQC75_16175
03400 DNA repair and recombination proteins [BR:
slit03400
]
JQC75_16175
DNA replication proteins [BR:
slit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JQC75_16175
Chromosome and associated proteins [BR:
slit03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JQC75_16175
DNA repair and recombination proteins [BR:
slit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JQC75_16175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QRH01366
LinkDB
All DBs
Position
3655404..3655676
Genome browser
AA seq
90 aa
AA seq
DB search
MNRTELIAKIAESADLTKAEAGRALKSFEEAVTAAMKDGDKISIVGFGSFETSTRAERTG
RNPQTGKEIKIPAATIPKFKAGKALRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaactgaacttatcgccaagatcgctgagagtgctgacctgaccaaggccgaa
gccggccgtgcgctgaaatccttcgaagaagctgtgactgccgccatgaaagacggcgac
aaaatttctatcgtaggtttcggttcttttgaaaccagcacccgcgcagagcgcactggt
cgcaacccgcaaaccggcaaggaaatcaaaatccctgcggcgaccattccaaaattcaag
gccggcaaggccctgcgtgacagcgtgaactaa
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