Spodoptera litura (tobacco cutworm): 111350434
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Entry
111350434 CDS
T08157
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111350434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111350434
Enzymes [BR:
sliu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
111350434
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111350434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
AAA_10
ATP_bind_1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111350434
NCBI-ProteinID:
XP_022817787
UniProt:
A0A9J7DXC7
LinkDB
All DBs
Position
11:12267761..12278581
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AA seq
660 aa
AA seq
DB search
MTEVQLQEFKLEPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKAKPYEFHTGAKVAV
FTWHGCTVELRGKTEVSYVAKETPMVVYLNVHAALEQQRVAAEQESTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMGRRPIYVDLDVGQGHISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHSSPGENLELYNTIVGRLAEVIAERCENNKKASTSGVIINTCGWIKGDGYKVLSHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSSTQRAEARDARIREYF
YGKRTPYYPHSFDVKFNDLKIYKVGAPSLPASCMPLGMRAADALTKVVQVSPSGALQHRV
LAVSFAAGPHDDVLHSNLAGFVCVSVPSTIFIYIILQHRVLAVSFAAGPHDDVLHSNLAG
FVCVSVPSTIFIYIILQHRVLAVSFAAGPHDDVLHSNLAGFVCVSVPSTIFIYIILQHRV
LAVSFAAGPHDDVLHSNLAGFVCVSVPSTIFIYIILQHRVLAVSFAAGPHDDVLHSNLAG
FVCVSVPSTIFIYIILQHRVLAVSFAAGPHDDVLHSNLAGFVCVSVPSTIFIYIILQHRV
LAVSFAAGPHDDVLHSNLAGFVCVTAVDMDRQMLTILSPQPRPLPNTVLLLSELQYMDNH
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggtacagcttcaagagttcaaactagagccggactcagaactaagatttgaa
gtggaatctaaaaacgaaaaagtagttttagaggtgaagagtggttatgcggaacttttt
ggcacagaactcgtgaaagcgaagccatatgagttccatacgggtgcgaaagttgctgtg
ttcacgtggcacggctgtactgtggagttgaggggtaaaactgaagtcagttatgtggct
aaagagactccaatggtggtatacctcaatgtccacgcagctcttgagcagcaaagagtg
gcagcggaacaggagtccactcgaggtccagtcaccatggttgttggacctggagatgtg
ggcaagtccactcttaccaggatcctattgaattacgcagtgagaatgggacggaggccc
atttatgttgatcttgacgttgggcagggacatattagtgtaccgggtactataggggca
ctcttggtagaaagaccagcatcaatagaggaagggttcagtcagcaggccccactggtg
tatcactttggacatagttctccaggagagaacctcgaactgtacaacactatagtgggc
agactggctgaggtgatcgctgaacgatgtgagaataataaaaaagcatcgacatcagga
gtcatcatcaacacttgtgggtggattaaaggagatggatataaggtgctctcacacgct
gctcaagcttttgaggttgatgtgatcctggttctggacaatgagagactttacaacgag
ctcaagcgagacatgcctaagtttgtgaaagtcgtctatttaccaaagagtggaggtgtg
gtagaaaggtcgtcgacacagcgcgcggaggcccgcgacgcgcgcatccgcgaatatttc
tatggcaaacggacgccgtactacccgcactccttcgatgtcaagttcaacgacttgaag
atatataaggtgggcgcgccgtcgctgccggcgtcgtgcatgccgctgggcatgcgcgcg
gcggacgcgctgacgaaggtggtgcaggtgagtccgtcgggcgcgctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgtgtcagtaccttccactatctttatatatatcattctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgtgtcagtaccttccactatctttatatatatcattctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgtgtcagtaccttccactatctttatatatatcattctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgtgtcagtaccttccactatctttatatatatcattctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgtgtcagtaccttccactatctttatatatatcattctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgtgtcagtaccttccactatctttatatatatcattctgcagcaccgcgtg
ctggccgtgtcgttcgcggccggcccgcacgacgacgtactgcactccaacctcgccggc
ttcgtctgcgttacggcagtggacatggaccgacagatgctgacgatcctgtccccgcag
ccgcggccgctgcctaacaccgtcctgctcctgtcggagctgcagtacatggacaaccac
tag
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