Spodoptera litura (tobacco cutworm): 111351688
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Entry
111351688 CDS
T08157
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111351688
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111351688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
MbeB_N
Motif
Other DBs
NCBI-GeneID:
111351688
NCBI-ProteinID:
XP_022819508
UniProt:
A0A9J7ILQ2
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Position
14:complement(9547159..9559217)
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AA seq
1963 aa
AA seq
DB search
MEGLTQNEKIIWSCWKEKSPRDVVREAAAKGTHIELAITYLKEKNGWNDATAREWFLAEV
KAWTVQLLLRKQIFKVLHILNKVKISPELHLMTLARDSAQIEYRDFIVEHLEKLSKDMSN
ETKEEWLHFKRHWNLLRYLEKAFESEGTFKQNKVFGMGKDRIVVNESEIKALTIDKIEKY
PQQWKSKIATALFFNSFEFSLLDFSAPVEMWNYLVENNKAMILVRWINVQTSEVVRDMNA
RYIFFNNEGFAKKLLNVDTVGFDTHVLESLDEIFRKWPVTNEMIENIAKSNCFAYTKLCI
YDTLASYGIVNESERNNLYLIISRLARTQNLKLIDDIFTESCSTISREHFYVELAKYCVK
NKLYKVLTLCVEGNILDTDLSDVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTCEQI
AKENIDDYVSSNPHLVLGMILLEDAKKLFDIFSKDDFLQFKDFKLPNKFYKDKLPHLYNI
YKKYADANHTYELKDVNVYQLLSGYRGLDVSKIFEFQLVNQSTNSLLTDKPDRRSLGSLL
SSDVDVKSASIKALSQRAMEMPDFADEKLMKKYGYVAKLNHVYYLKQYRPCNASQAFVSQ
QYQTYNRLQDKSVKSACCEAHALALQNWFDGAMTACTVSFIAMIGCNPTRCRVHISAAKM
IKNHLMEYRGLSEEKANKTVNEYMSKLIQSNDEAAREMLRYMEEITLSRLNERQKRDGKV
DMALVLYECQTMVKFATLHNLPLPELQLREFVKANSWFNFLLFGDVFRYPLSQMLQLAQE
FEKKSYAEHLKHIMLHRTVDEGVEKDSKTNASNGQRRVSRLNSVEIGSVLIQSPSPTQVG
SFEFPSSAYMGRELWEVAAACHGPEDPPAALLRAADICREPLLVLIASCYEPNAVEMLWP
QWILSSLSLSPRSQGVLQQLMTQQQSASEQFQKVAELCLLEGYVTTLHEAMLIFMPESPL
TLFTAFLHRCIRQHNFDSETTKLLTSFLQHAQRKYSVGASGAPWQLSKEALQKVSVSLVK
IALSNNFDSAYLQREFLKCLADNQFEKGFTVPSPNFSTLYEILKISMETSLAINISKLLQ
DDSQKYVEECVQMYTAKRDYSVALKIAKLSGVPVNSILIAEWTHKYENLLTREEMLEDKG
ITLFIAQCSEAFKKATVTFKDATEFLVTHVNNITDTAQKFYSYRIIMSWFEENLEYGKRR
EEIEHLMWDAYFKNEAPNTIFLNSYQSTMHFIMNGQKDPNISKKIGQANAEKPFTMMLDE
IEIESDVSNIENVVLLEDPEAIDNWRRVMNQLLELKLLVDAFRLSALFKSPPEFRYRPPA
CPVQIVRTCLKLAEGSCSPYELPQELRLVISSPVLQNKLSISGISDASFEELVVIQEKQE
NVPESAHLAAREEADRLSALDALAVRSGLTLAKQVASYFRIALQIGWDYTSVLKYQNHAI
DFINLVSGRARMSLANLVFKTFNIPTKQVAEYLCKEIVAAIISPHLVKTSTFRQKEHFQY
TLWGYALNADIEMFLNMRPDACSQIGKLILDHLIAFQKIYKCSNVSGTSKPDNLLDDNGL
DVENLIDEEYQNVEGDEAESVLTEEGTVLSAETESVYSVSTVYTVYCNKMSRDCRRNLFD
VITKNNVHIRYEVKSNIRKITKGAKLSTKQVNIICLELLVLAHECFACACDTEGVATTLR
SAQALAARLLASRSWRLMVRLLTGLARYTECAYVFQALRDNHQFEFLLGQFDYMLGQQVD
KIAEFKQGLLDFLKTHCPGDTDTYIMVALHFNMYAEAANVKRKQAVNLIDDLEKMALDSA
KATSKKPFQPPTWLQIHDSVPTRSLLDTALNHCTDAAELYLQGGCTGFAGEMASLAQQIA
LQISLLNASPTRLILNRSTEQMYKLVSEYLSFMEGLVLLAGRGGEAWRELAYRRTLTNDQ
AYLRDMAMYRPDVAHDFLNRYKTERNKTPGSQAAMNELRNLCR
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttgacacagaatgagaagattatatggtcgtgttggaaagaaaagtctccg
agagatgtggtcagggaggcggctgcgaagggtactcatatcgaactggcgatcacctat
ctcaaggagaaaaatggatggaatgatgccactgccagggaatggtttctggccgaggtg
aaagcatggactgtacagctgttattgagaaaacagatatttaaagttctgcatattttg
aacaaagttaaaataagtccagaactacatctgatgaccttagctcgggactctgcacag
attgagtacagagatttcattgtagaacatcttgagaagttgtccaaggatatgagtaat
gaaacaaaagaggaatggcttcattttaaaagacattggaatcttctccggtatttagaa
aaagcatttgagagtgaaggaactttcaaacaaaataaagtttttggtatgggaaaagac
cgcatagttgtcaatgaaagtgagatcaaggccctgactatagataaaatagaaaagtat
ccacaacaatggaaaagtaaaattgccacagcattgttctttaattcatttgaattctct
ttattagacttctcagctccagtagaaatgtggaactatttggtggagaacaacaaagcc
atgatccttgtccgttggatcaatgtacagacttcagaagtagtgcgcgacatgaacgcg
cggtacatattcttcaataacgaaggattcgccaagaaacttctcaatgttgacaccgta
ggctttgacacacatgtcctagagagcttagacgaaatattccgtaaatggccagtcaca
aatgaaatgattgaaaatattgcaaaaagcaattgttttgcttacaccaagctatgcatt
tacgacacattggcctcttacggcattgtgaatgaaagtgagcgaaataatttatattta
atcatatcaagactagctcgcacacagaacttgaaattaattgacgacatcttcaccgaa
tcatgctccactatcagtcgcgagcacttctatgtggagctagctaagtattgtgttaag
aataagttatataaagtactgacgctatgtgtagagggtaatatattagacactgaccta
tctgacgtcgagcaggaagcgaaagattgcatagagctctggttgttgtttaaaagcata
gaacaaacttccgacagacaaagccacgtgctgcccgtatacaaaacctgtgagcaaatc
gccaaggaaaacatcgacgactatgtttcctctaatccacatttagtattaggaatgata
cttctagaagacgctaaaaagttattcgatatattttccaaggatgactttttacagttc
aaagactttaaattgccaaataaattttacaaagacaagcttccacatttgtataatatt
tacaagaaatatgcggatgcaaatcatacgtatgaattaaaagacgtgaatgtgtaccag
ctgttgtctggttaccgcggtctcgatgtgtccaaaatatttgaatttcaactagtcaac
cagagtacgaacagtctgctcactgacaagccagatagacgcagcctggggagtctgttg
tcaagtgatgtagatgtaaagtccgctagtatcaaagctttatcccagagagctatggag
atgccagattttgcggatgagaagctaatgaagaagtatggctatgtagctaagttgaac
catgtgtattatttgaaacagtatcgcccctgcaatgctagccaagcgtttgtttcacag
cagtatcagacatacaatcgtttgcaagacaagagcgtaaagagcgcgtgctgtgaggcg
cacgcgttagcactgcagaattggttcgacggtgctatgaccgcttgcactgtgtctttc
atagctatgataggatgcaatccaacacgatgcagggttcatatctctgctgctaaaatg
ataaagaatcatttgatggaatacagagggttgtccgaagaaaaagcgaataaaacagtc
aacgagtacatgtcgaaacttatacagagtaatgatgaagctgctagggagatgttgcgg
tatatggaagaaataactttgagccgattgaatgaaaggcagaagcgggatggtaaagtg
gacatggcgctggtgttgtacgagtgtcagacgatggtcaagttcgccacgcttcacaac
ttgccgctaccagaactgcagttgcgggaattcgtgaaggccaactcctggtttaacttt
ctccttttcggcgatgtgtttcgctacccactcagtcagatgctccagttagctcaagag
ttcgaaaagaagtcgtatgcggaacatctaaagcacataatgctgcatcggactgttgac
gagggtgtcgaaaaagatagtaaaacaaatgcaagtaacggacagaggcgagtttcgaga
ttgaattccgtggaaattggttctgtcctcatacagagtcctagtccgacgcaagtgggc
agtttcgagttcccctcaagcgcgtacatgggacgggagctgtgggaggtggcggccgcg
tgtcatggtccggaggatccgccggccgccttactgagggctgctgacatctgcagagaa
cccctattggtgcttattgctagttgctacgagccaaacgcggttgagatgctctggcct
caatggatcctatcctccttatctctcagtcctcgttctcaaggagtgctgcagcaattg
atgacgcagcagcaaagtgcctcggagcagttccagaaagtagctgaactgtgtttatta
gagggctacgtcaccactctacatgaagctatgctcatttttatgccggaaagcccccta
actctatttacggccttccttcaccgttgtattcgtcagcacaactttgattccgaaact
acgaaactcctcactagtttcctacaacacgcacaacgtaagtacagcgttggcgctagt
ggcgcgccatggcaactgtccaaggaggctttgcaaaaagtttctgtgtctctggtcaaa
attgcgctgagcaataacttcgatagcgcgtaccttcaaagagagttcctcaaatgtcta
gctgataatcagttcgaaaaaggatttacggtaccatcacctaacttctcaacactatac
gaaatactcaaaatatcaatggaaacatccctagcaataaacatatcaaaattacttcaa
gacgattctcagaaatatgtagaagaatgcgtccaaatgtacaccgctaaaagggactat
agtgttgctttgaaaatcgcaaagctttctggggtacccgtaaatagtattttgatagca
gaatggacgcataaatacgagaatcttcttactcgagaagaaatgttagaagacaagggt
ataacattatttattgcccaatgcagtgaagcgttcaagaaggcaacagttactttcaag
gacgcgacagaattcctcgtcacacacgtcaacaacatcaccgataccgcacaaaagttc
tactcctaccgaatcattatgagttggttcgaagagaatttagaatatgggaaacgacgg
gaagaaatcgaacatctcatgtgggatgcgtacttcaaaaacgaggcaccgaacacgata
ttcctgaacagttatcagagcacaatgcattttataatgaacgggcagaaagacccgaat
atttcgaagaagatcggccaggctaacgcggagaaaccatttaccatgatgctggacgag
atagagattgagtcggatgtgagtaatatagagaatgtggtgttattagaggatcctgaa
gctatagataactggagaagagttatgaatcagttgctagagttgaaactcttggttgac
gcgtttaggttgtcggccttgttcaaaagcccgcctgagttcaggtataggcctccagcg
tgccccgtgcagatagtaaggacctgtttgaagctcgcggaaggttcgtgctcgccttac
gaactgccgcaagagttgaggctggtgatatcttctcctgtactgcagaataaattgtcg
atatcgggtatatcggacgctagtttcgaggagttagtggtgatacaagaaaaacaggag
aatgtgccagagagtgcccacttagcggcgcgagaggaagctgaccggttgtcagcactc
gatgctttggctgtcaggagtgggttgacgcttgctaagcaggttgccagctacttccgc
atagctctacaaataggatgggattacacttcagttttaaaatatcagaaccacgcgatt
gacttcattaacttagtgagtggacgggcgcggatgtctcttgccaatctggtcttcaaa
acatttaatattcctactaaacaggtcgcagaatacctctgcaaagaaatagtagcagct
ataatatcgccccatttagttaaaacatcgacatttagacagaaggaacactttcaatac
actctctggggatacgcattaaacgcagacatcgaaatgttcctcaacatgcgaccagac
gcctgcagtcagatcggcaaactgatccttgaccacctcatcgccttccaaaagatttac
aaatgctctaatgtgtctggtacgtccaaaccggataatttactagatgataacggacta
gacgttgaaaatctcatagatgaagaatatcaaaacgtagaaggtgatgaggcagagtca
gtgttgactgaggagggaactgtgctctcagcggaaactgagtcagtttactcagtgtct
actgtgtatactgtgtattgtaataagatgtccagagattgccgaaggaatttgttcgat
gtgatcactaagaataatgtccatatccgctatgaagttaagtccaatattaggaagata
actaagggtgccaaattgtctactaagcaggtaaacataatctgcctagagctgctagta
ctggcacacgagtgtttcgcttgcgcgtgcgacacggagggcgtggccacgacactgcgg
tctgcgcaggcgctggcggcgcgactgctcgcctcgcgctcatggaggctcatggtccgg
ctccttactggactggcgcggtacactgagtgcgcctatgtgttccaggcattacgagac
aaccaccaattcgagttcctactaggtcagttcgactatatgttaggacaacaagtggac
aagatagcggaattcaaacaaggtctactagacttcttgaagacccattgcccgggagac
acggatacttatatcatggtcgccttacacttcaatatgtatgctgaggccgctaatgtc
aagaggaaacaggcagtgaatcttattgatgatttggagaagatggcgttggattcggca
aaggcaacatcaaaaaaaccgtttcaaccaccaacatggttgcaaattcacgactctgtg
ccaactaggtctctcttagacacggctttgaaccactgtaccgatgcagccgagttatac
ttgcaaggtggttgtactgggtttgcgggagaaatggcgtcgcttgcccagcaaattgcg
ttgcaaatatctttgctaaatgcatcgcctaccagactcatcttaaacagaagtactgag
caaatgtataaacttgtcagcgagtatttgagtttcatggaaggtctagtcctactggct
ggtcgtggcggcgaggcgtggcgtgagctcgcgtatcggcgtacactgaccaacgaccag
gcgtacttgagagatatggccatgtacaggcctgatgtcgcacatgatttcttaaataga
tacaaaacggagaggaacaagactccaggctctcaagcagcgatgaacgagcttcgtaat
ctgtgcagatga
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