Shewanella livingstonensis: EGC82_02705
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Entry
EGC82_02705 CDS
T05875
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGC82_02705 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slj03019
]
EGC82_02705 (recQ)
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_02705 (recQ)
Enzymes [BR:
slj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGC82_02705 (recQ)
Messenger RNA biogenesis [BR:
slj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EGC82_02705 (recQ)
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGC82_02705 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AZG75079
UniProt:
A0A3G8LZH2
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All DBs
Position
582274..584082
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AA seq
602 aa
AA seq
DB search
MLTTEQDVLAASLQQVFGYRAFREGQREVIEQSLQGQDTLVIMPTGGGKSMCYQLPAIVL
PGVTVVVSPLISLMKDQVDSLMQSGVSAAYLNSSLPREQSAEVLRKLHAGEIKLLYVSPE
RLLRPDFIERLQSVDISMFAIDEAHCISQWGHDFRPEYAALGQLKQYFPYLPLMALTATA
DHATRLSICERLGVTPYTLLSSFDRPNIRYTVAEKLNATNQLRQFLTIQNGTSGIVYCSS
RRRVDEVAERLRLQGFNAQAYHAGLSQEERGNVQDKFLKDQIDIVVATVAFGMGINKSNV
RFVVHYDIPKSIEAYYQETGRAGRDGLDAEAYMLFDPADIGRVRHLIEQSEPGPQQQVEF
HKLHTMAAFAEAQTCRRQVLLNYFDEVASKPCGNCDICLDPPKRYDGTEDAQKVLSCIYR
LQQRFGIHHVIEVLRGSKAANIVDRGHDRLSTWGIGKDKSTEFWLSVIRQLIHLGLMSQD
ITRGSAIKLNSAARPILKAELSLMLAEPRIQLLDVKRKPNSRAPQQYDRKLFARLKLLRR
ELAEKNDIPPYLVFNDATLAEMCAMLPTSPGEMLAVNGVGQIKLDRFGGEFLDEITDYLT
KG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgttgacgacagagcaagatgtacttgctgcgagcttacagcaggtttttggttatcgt
gcctttcgtgaagggcagcgagaagtcattgagcaaagtttacaaggccaggacacgtta
gttattatgcctactggtggcggcaaaagtatgtgttatcaattacctgcaattgtgctg
cctggagtgacggtggtggtgtcgccattaatttcgttgatgaaagatcaagtcgacagt
ttaatgcaaagtggcgtatcagcagcttatctgaactcatctttaccgcgcgagcaaagt
gcagaggtgttgcgtaagcttcatgcaggcgagattaaattgttgtatgtgtcgcctgag
cgcttgttacgtcctgattttatcgagcgccttcaatctgttgatatttcaatgtttgct
attgatgaagcgcattgtattagtcaatggggtcatgattttagacctgaatatgctgcc
ttaggtcagttaaaacagtattttccttacttacctttaatggccttaactgcgacggca
gatcacgctactcgtttgagtatttgcgaacgtttaggcgtgacgccttatacattgctg
tcgagttttgatcgccctaacattcgctacacagtggctgaaaaacttaatgcaacaaat
cagttacgtcagtttttaaccattcaaaatggtaccagcggcattgtttattgcagtagc
cgtcgacgagttgatgaggtggcagagcgtttacgcttacaaggatttaatgcccaagcg
tatcacgctgggttgagtcaagaagagcgtggtaatgttcaagataaatttcttaaagat
caaattgatattgtggtggcaaccgtggcctttggtatggggattaataaatccaacgta
cgttttgtggtgcattacgatattcccaaaagtattgaagcctattaccaagaaacaggc
cgagctggtcgtgatggtttagacgctgaagcttatatgttgtttgaccctgctgatatt
ggccgagttagacatttaattgagcagtcagaaccggggcctcaacagcaagtcgaattt
cataaattgcataccatggcagcgtttgctgaagcgcagacgtgtcgtcgccaagtgttg
ctaaactactttgatgaagtggcatcaaagccttgtggaaactgcgatatctgccttgac
ccacctaagcgatatgatggtactgaagatgctcaaaaagtgctgtcttgtatttatcgt
ttacagcaacgttttggtatccaccatgtaattgaagtattacgcggttctaaagcggct
aatatagtggatagaggtcatgatagattatcgacgtggggtattggtaaagataaatca
accgagttttggcttagtgttatccgccagctaattcatttaggtttgatgagtcaggat
attacccgcggctctgcaattaagcttaactctgccgcaagaccaatattaaaagctgag
ttgtcgttaatgttagctgagcctcggatccagttacttgatgttaagcgcaaacctaat
tcgcgtgcaccacagcaatatgatcgtaaattatttgctcgtttaaaattactgcgtcgc
gaactggcggaaaaaaatgacattccaccttatttagtctttaacgatgccacgttagct
gaaatgtgtgccatgctgcccacaagccctggcgagatgctcgcagtaaatggtgtcggg
cagattaagctcgaccgttttggcggcgaatttctagatgagataactgattatctaact
aaaggttaa
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