Spiroplasma litorale: SLITO_v1c11170
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Entry
SLITO_v1c11170 CDS
T04047
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sll
Spiroplasma litorale
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sll03016
]
SLITO_v1c11170 (trmE)
Transfer RNA biogenesis [BR:
sll03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SLITO_v1c11170 (trmE)
Prokaryotic type
Methyltransferases
SLITO_v1c11170 (trmE)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Roc
Dynamin_N
Ras
DUF815
MMR_HSR1_Xtn
AAA_29
ATP-synt_ab
GCV_T
FtsK_SpoIIIE
Peptidase_S28
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AKX34728
UniProt:
A0A0K1W3H4
LinkDB
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Position
complement(1221649..1223001)
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AA seq
450 aa
AA seq
DB search
MKISYDDIIVASATKISTQAISIIRVSGEGTIGLINSLIDKELEPKNGFYLRKIIHEGHV
IDECLFLVFIKNHSFTGEETVEINCHGGIFLVEKIIELVLSKGARLAAKGEFSQRAFLNG
KIDLIQAESINNIIHSKNNLALKLNAKMLIDKNNKKLQDIKENFINNISILQTAIDYPEY
DETQNTTSEIVLRDLLNIKKELVNIIDNSQKYNYINSGIKTLILGDTNVGKSSLLNSLIN
EDKAIVTDIEGTTRDIVEGTIRFKNFNLNLIDSAGLRKTSDVVELKGIEKTTKLIDEVNL
ILFVINKEKYDINLYNNIKEKEHIVVLNKADLLTETDIKTIKKSFNNLIIVSAKKNDINE
LKKELERRYDQEKILDEDVLILSNISHIELLKKVLESIDLIESNIIQGFDIDIIMIDLRN
SLDIINNMLGIFDSNEEILDNIFRKYCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagttatgacgatataattgtagcttctgcaacaaaaatatcaacacaagca
atatctataattagagtttcgggtgaaggaacaatcggtttaattaactctttaattgat
aaagaattagaaccaaaaaatggattctatcttcgtaaaataatacatgaaggacacgtc
attgatgagtgtttgtttctggtttttataaaaaatcattcttttaccggagaagaaact
gtagagataaattgtcatggtggtatttttttagttgaaaaaataatagaattagtttta
tcaaaaggggctagactcgcagccaaaggagaattcagccaaagagcatttttaaatggc
aaaattgatttaatacaagccgaaagtataaataatataattcactcaaaaaataaccta
gcattaaaacttaatgccaaaatgttaatcgacaaaaataataaaaaattgcaggatatc
aaagaaaactttattaataatatttcaatattacaaactgctattgactatccagaatat
gacgaaacacaaaatacaacttcagaaattgtattaagagatctgttaaatattaaaaaa
gaacttgtaaatataatagataatagccaaaaatataattatattaatagtggcataaaa
acactaatattaggggatacaaatgttggtaaatcatcactattaaattcattaataaat
gaagacaaagcgatagttacagatattgaaggtactacaagggatatagttgaagggaca
attagatttaaaaactttaatctaaatctaatcgactctgcaggattgagaaaaacaagc
gatgtagttgaattaaaaggaattgaaaaaacaactaaactaattgatgaggtaaattta
attttatttgtaattaataaagaaaaatatgatataaatctttacaataatattaaggag
aaagagcacattgttgttttaaacaaagctgatcttctaacagagacagatattaaaact
attaaaaaaagttttaataaccttataattgtttctgctaaaaaaaatgatataaatgag
ttaaaaaaggaattagaaagaagatacgaccaagaaaaaatactagatgaggatgttttg
atactatcgaatatctctcacatagaattacttaaaaaagttttagagtcaattgatttg
attgagtctaacataatccaaggttttgatattgatattataatgattgatctaagaaac
tcattagatattatcaataatatgcttggaatatttgattctaatgaagagattttagat
aatatatttagaaagtattgtcttggaaaataa
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