Shewanella loihica: Shew_2770
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Entry
Shew_2770 CDS
T00489
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
slo
Shewanella loihica
Pathway
slo00900
Terpenoid backbone biosynthesis
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Shew_2770
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slo01006
]
Shew_2770
Enzymes [BR:
slo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Shew_2770
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Shew_2770
Prenyltransferases [BR:
slo01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Shew_2770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABO24636
UniProt:
A3QGN8
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All DBs
Position
3274862..3275743
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AA seq
293 aa
AA seq
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MLNEAITRYQQRVDGQLRHFINAQDDTEPQLKAAMEHGALIGGKRIRPFLVYAVGEMLGV
PLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDALQTLA
FEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDLNATDRQIDLETLKRLHRLKT
GALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGKPQGSDC
ESNKSTYPKLLGLSGAQATAKSLIEDALSALAKLPYNSQLIAEFARFIIERRV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatgaagcgataacgcgataccagcagcgcgtcgacggccagctgcgccatttt
atcaatgcacaagacgataccgagccacaactcaaggccgccatggaacacggcgccctg
attggcggcaaacgtatccgcccctttctggtctacgccgtgggcgagatgctgggtgta
ccactggaaaggctagatgcctgcgctgccgccatcgaatgtattcatgcctactcgctg
atccacgacgatctcccggccatggacgatgacgccctgcgccgtggccagccgacagtg
catatcgcctttaatgaggccaccgccatcctggccggcgatgccctgcaaaccttggcc
ttcgagatcatcagccaggaaggcggcgagctgagtgccagccaacaactggccatggtg
cgcgccctcgccaaggcgtctggctacagcggcatgtgtggtggtcaggcgatggatctt
aacgccaccgacagacagatagatctcgagaccctaaagcggttacacagattaaaaacc
ggcgccttgattcgctgtgcagtagaattacctatcattgctgccaaggtcacagatgag
caagcgagccatctgttaacatttgccgacgccatcggcctcgccttccaggtacaagac
gacgtgctggacatcatcgccagcacagaagagctgggtaagccccagggctcggactgc
gaatcgaacaagagtacctatccgaaactactcggtttatccggggcccaagcgactgcg
aaaagtttgatcgaagacgccctatcagcgctggctaaattaccatacaatagccagtta
attgccgaattcgcccgtttcatcatagagcgaagagtataa
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