Salinispira pacifica: L21SP2_0252
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Entry
L21SP2_0252 CDS
T03013
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slr03016
]
L21SP2_0252
Transfer RNA biogenesis [BR:
slr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
L21SP2_0252
Prokaryotic type
Methyltransferases
L21SP2_0252
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Gtr1_RagA
Dynamin_N
Ras
Roc
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AHC13694
UniProt:
V5WDQ3
LinkDB
All DBs
Position
280000..281391
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AA seq
463 aa
AA seq
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MMQDDRIAALATPLGESALAVIRTSGEGTLQALSRGFSRPGTLQEAPGNTIIYGWLQYDE
SRRVDEVTVAVFRAPRSYTGEESAEIYCHGSIPGIQKIMELLFTLGFRQAEPGEFSLRAF
INGKMDLTRAEAVHEIVRSQSRKAQSLALNRLSGRVFEEIDRVKSRLVDIMAAVSVQLDY
PDDELPGEDDDSGYVRSLIPMDTVQDAVSGLERLVSSYRSGRLYQQGARVALAGQTNAGK
SSMFNLFLKEDRSIVSNIHGTTRDYIQAPVVLDGIPLSLYDTAGLREVDEIIEKEGIRRS
GQVIENSSVILYLVDGTNSDKSAHAFDEKQLERIGELNLPCVKIWTKTDLPQCAPAPKGF
LPLSMISGEGFDRVQQAMMEALLQGERLAGDGDLVIDSLRQKQLIDDALDGLQQALTSME
GDQPLDIIAMDLQRSIRSLGEITGEVSSEDILDRVFSGFCVGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggacgaccggattgccgctttggcaactcctttgggagaaagcgcacttgcg
gtgatcagaacaagcggtgagggtacgctccaggctttgagcaggggattttcccggccc
gggacgctgcaggaggctccgggaaacacgattatctacggctggctccagtatgatgaa
tcgcggcgggtggatgaagtgacggttgccgttttccgtgctccccggagctataccgga
gaggagagtgcggaaatttactgtcacggcagtattcccggcatccagaagatcatggaa
cttctgttcactctcgggttccgtcaggccgaacccggagaattcagtctcagagcattc
attaacggcaagatggatcttacccgtgcagaagctgttcatgaaatagtcaggtcacag
agccggaaagcccagagcctggctctgaacaggctttccggaagagtctttgaagagatt
gaccgggtgaaaagccggctggtggatattatggctgcggtaagcgttcagctggattat
ccagacgatgagctccccggagaggatgatgacagcggctacgtacgttcgctgattccc
atggatacggtacaggatgcggtatcggggctcgagcgtctggtcagcagctaccgcagc
ggaaggctgtatcagcagggggccagggttgccctggccgggcaaaccaatgcgggaaaa
tccagcatgtttaatctttttctgaaggaagaccgctcaattgtatccaacatccacgga
accacccgggattatatccaggctccggtggtgctggacggcattcccctctcactatac
gatactgccgggctgcgggaagtggatgaaattattgaaaaggaaggtatccgcagaagc
ggtcaggtgattgaaaattccagcgtcatcctgtatcttgttgacggtactaattccgac
aaatccgctcatgcttttgatgaaaagcagctggaaagaatcggtgaattgaatcttccc
tgtgtgaaaatctggaccaaaaccgatcttccccaatgcgccccggcacccaagggcttt
cttcccctctccatgatcagcggtgaagggtttgaccgggtgcagcaggcaatgatggag
gctctccttcagggcgagcgccttgccggtgacggcgatctggtaatcgactcccttcgc
cagaaacagctgatagatgacgccctggacgggcttcagcaggctttgaccagcatggag
ggcgatcagcccctggatattattgccatggatcttcagcgatccatcagatctctgggg
gaaattaccggggaggtcagttcggaggatatcctggacagggtgttctcgggattctgt
gttgggaaatga
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