Streptomyces lincolnensis: SLINC_2168
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Entry
SLINC_2168 CDS
T04801
Name
(GenBank) putative secreted pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls00040
Pentose and glucuronate interconversions
sls01100
Metabolic pathways
sls02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SLINC_2168
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLINC_2168
Enzymes [BR:
sls01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SLINC_2168
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ANS64392
UniProt:
A0A1B1M7L6
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Position
complement(2585689..2586942)
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AA seq
417 aa
AA seq
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MGILSIPAHAEARDLGRDTLPANDGWAAAGAGTTGGSAADADHVFTVTDRAGLVRALDGG
SATPKIIKIAGTIDANTDDDGDHLDCSDYTTGGYSLRKYLAAYDPRTWGSAKPSGEQEVA
RQASAKKQAERVELLVGSNTTIVGLKSAVLKGASLQVKNADNVIVRNLDLRDAYDCFPVW
QPNTGGLGDWKTAYDTLWLSGATHVWVDHVTLSDKGHPDAAEPTHFARNYLRHDGLLDIT
NGSDLITVSWSRFAGHDKAMLIGNGDTATGDRGRLRVTLHHNEFESVVQRAPRVRFGQVH
LYNNRYVVPEDAHDYRYSIGVSTESAIHAENNAFHTPGHVEAADLVKSWNGTALHQRGTL
FNGYPVDLLAIHNAYNSGSERDLTADVGWTPTLHTKIDSAATADREVARGAGAGRLL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggggatcctgagcattcccgcccacgccgaggcccgcgacctcggccgcgacaccctg
cccgcgaacgacgggtgggccgccgcgggagcgggcaccaccggaggatcggccgccgac
gcggaccacgtcttcaccgtcaccgaccgcgccggactggtccgcgccctggacggcggc
agcgccaccccgaagatcatcaagatcgccgggaccatcgacgccaacaccgacgacgac
ggcgaccacctggactgctccgactacaccaccggcggctacagcctcaggaagtacctg
gccgcctacgacccccgcacctgggggtccgccaagccgagcggcgagcaggaggtggcc
cgccaggcttccgcgaagaagcaggccgagcgggtcgaactgctcgtcggctcgaacacc
acgatcgtgggactcaagagcgccgtcctcaagggcgcgagcctccaggtcaagaacgcg
gacaacgtcatcgtccgcaacctcgacctgcgggacgcctacgactgcttccccgtctgg
cagcccaacaccggcggcctcggcgactggaagacggcctacgacaccctgtggctgtcc
ggggcgacacacgtctgggtcgaccacgtgaccctgagcgacaagggccacccggacgcc
gccgagcccacccacttcgcccgcaactacctgcgccacgacggcctgctggacatcacc
aacgggtccgacctgatcaccgtctcctggagccggttcgccggccacgacaaggcgatg
ctcatcggcaacggcgacacggccaccggcgaccgcggcaggctccgggtgaccctgcac
cacaacgagttcgagtccgtcgtccagcgcgcgccgcgcgtccgcttcggacaggtgcac
ctctacaacaaccggtacgtcgtccccgaggacgcccacgactaccgctactcgatcggc
gtctccaccgagtccgcgatccacgccgagaacaacgccttccacacccccggccacgtc
gaggccgccgacctggtcaagagctggaacggcaccgccctgcaccagcggggcaccctc
ttcaacggctatccggtggacctgctcgccatccacaacgcctacaactcgggcagcgag
cgtgatctcacggcggacgtcggctggacacctaccctgcacacaaagatcgacagcgcc
gccacggccgaccgagaggtggcacgcggcgcgggcgcagggaggctgctgtga
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