Streptococcus lutetiensis: KE3_0047
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Entry
KE3_0047 CDS
T02775
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
slu
Streptococcus lutetiensis
Pathway
slu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KE3_0047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slu03021
]
KE3_0047
03400 DNA repair and recombination proteins [BR:
slu03400
]
KE3_0047
Enzymes [BR:
slu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KE3_0047
Transcription machinery [BR:
slu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KE3_0047
DNA repair and recombination proteins [BR:
slu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KE3_0047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGS04638
UniProt:
S5RIK0
LinkDB
All DBs
Position
43706..47344
Genome browser
AA seq
1212 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGQGSFVAKMGAEAIQDLL
KRVDLKSEIAELKEELKTATGQKRIKAVRRLDVLDAFYKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEPGREGEGMIFKDRDEAVMAYRNGYVHLHTRVGI
TVDSMPNKPWTDEQKHKIMVTTVGKILFNDIMPDDLPYLQEPNNANLTEKTPDKYFLAPG
QDIRTVIDSLDINVPFKKKNLGNIIAEIFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKQEIIDAAHTKVEQINKAFRRGLMTDDDRYVAVTTTWREAKEELEQRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRAITDGKEVTETL
EERLVGRYTKKSVKHPETGEVIVGPDVLITEDMAAEIVKAGVEEVTIRSVFTCNTRHGVC
RHCYGVNLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVVDIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVAIGDE
VHRGASLTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRIMDPGDTDLLPGTLMDIADFTDANKDVVISGGIPATARPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNELETSEEA
EIVEATATTEAE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaggtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactatcgtacgctcaaa
ccagaacgtgaaggtctttttgatgaagtaatctttggaccaacaaaagactgggaatgt
gcttgtggtaaatataaacgtattcgttataaaggaattgtttgtgaccgctgtggtgtt
gaagtaacacgtgctaaagttcgtcgtgaacgtatgggacacattgaattgaaagctcca
gtatcacacatctggtacttcaaaggtattccatcacgcatgggacttactcttgacatg
agtccacgtgctcttgaagaagttatttacttcgctgcttatgtagttatcgatccaaaa
gatactccgcttgaaccaaaatcacttttgactgagcgtgaatatcgtgaaaaattacaa
gaatacggacaaggatcatttgttgcgaaaatgggtgcggaagctatccaagatcttctt
aaacgcgttgatttgaaatctgaaatcgctgagcttaaggaagaattgaaaacagcaaca
gggcaaaaacgtatcaaagctgtccgtcgtttagatgtgcttgatgccttctacaaatct
ggtaacaaaccggaatggatggtacttaacatcttgccagttattccacccgatcttcgt
ccaatggttcaattggatggtggacgtttcgctgcatctgacttgaacgacctttaccgt
cgtgttatcaaccgtaacaaccgtttggctcgtttgcttgaattgaatgcccctggtatc
atcgtgcaaaacgaaaaacgtatgttgcaagaagctgtcgatgctcttatcgataacggt
cgtcgtggtcgtccaatcacaggtcctggtagccgtcctcttaaatctttgagccacatg
cttaaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgatttctct
ggacgttcagttatcgctgtaggtccaacacttaaaatgtatcaatgtggtgtgccacgt
gaaatggctatcgaattgttcaaaccatttgtaatgcgtgaaatcgttgctcgtgattac
gctggtaacgttaaagctgctaaacgtatggttgaacgtggagatgaacgtatttgggat
attcttgaagaagttatcaaagaacacccagtacttcttaaccgcgcacctactctccac
cgtttgggtatccaagcctttgaaccagtccttatcgatggtaaagcacttcgtcttcac
ccacttgtttgtgaagcctacaatgccgacttcgatggtgaccaaatggccatccacgta
ccactttctgaagaagctcaagcagaagcacgtcttcttatgcttgccgcagaacacatc
cttaaccctaaagatggtaaaccagtcgtaacaccatctcaagatatggttcttggtaac
tactacctaactatggaagaaccaggtcgtgaaggtgaaggaatgatcttcaaagaccgc
gatgaagcagttatggcataccgtaatggttatgttcacttgcacacacgtgttggtatc
acagttgatagcatgccaaacaaaccatggactgatgaacaaaaacacaaaatcatggtt
acaactgttggtaaaatcctctttaacgacatcatgcctgatgatctaccttaccttcaa
gaaccaaacaatgctaacttgactgaaaaaactccagataaatacttcttggcacctggt
caagatatccgcactgttatcgacagcttggatatcaacgttccattcaagaagaaaaat
cttggtaacattatcgcggaaatctttaaacgtttccgtacaacagaaacatcagccttc
cttgaccgcttgaaagaccttggttactaccattcaactcttgctggtttgacagtgggt
atcgccgatatcccagttatcgataacaaacaagaaattatcgatgcagcccacacgaaa
gttgaacaaattaacaaagccttccgtcgtggtttgatgactgatgatgatcgttatgtt
gctgttacaacaacatggcgtgaagctaaagaagaacttgaacaacgtctgattgaaaca
caagatcctaagaaccctatcgttatgatgatggactcaggagctcgtggtaacatctct
aacttctcacaacttgccggtatgcgtggtttgatggctgctccgaatggacgtatcatg
gaattgcctatcttgtctaacttccgtgaaggtttgtctgtcttggaaatgttcttctca
actcacggtgctcgtaaaggtatgactgatacagcccttaagactgctgactctggttac
cttactcgtcgtttggttgacgttgcccaagatgttatcattcgtgaagacgattgtgga
actgaccgtggtcttgtcatccgtgctatcactgatggtaaagaagttacagaaactctt
gaagaacgtcttgttggtcgttacactaagaaatctgttaaacaccctgaaactggcgaa
gttatcgttggtccagacgtattgattactgaagatatggcagctgaaattgttaaagct
ggtgtagaagaagtaacaatccgttcagtatttacatgtaacactcgtcatggtgtatgt
cgtcactgttatggtgtcaaccttgctacaggtgatgcggttgaagttggtgaagcagtt
ggtacaattgccgctcaatctatcggtgaacctggtacacagcttacaatgcgtaccttc
cacacgggtggtgttgcgtcaaataccgatatcacacaaggtcttcctcgtatccaagaa
atctttgaagctcgtaaccctaaaggtgaagcagttatcactgaagttaaaggtactgtt
gttgacatcgaagaagatgcttctacacgtactaagaaagtttacgttcaaggtaaaact
ggtatgggtgaatacgtggtaccattcacagctcgtatgaaagtagctattggtgatgaa
gttcaccgtggtgcttcacttactgaaggttctatccaacctaaacgtctccttgaagtt
cgtgatacattatcagttgaaacttaccttcttgccgaagtacaaaaagtataccgtagc
caaggggtagaaatcggtgataaacacgtcgaagtaatggttcgtcaaatgcttcgtaaa
gttcgtatcatggatccaggtgatacagatcttcttccaggtacacttatggatatcgca
gacttcacagatgctaacaaagatgttgttatctctggtggtattcctgcaactgcacgt
ccagtacttatgggtattactaaagcttcgcttgaaactaattcattcttgtcagctgca
tcattccaagaaacaactcgtgttcttacagatgctgctatccgtggtaaaaaagatcac
cttcttggtcttaaagaaaatgttatcatcggtaaaattattccagctggtacaggtatg
gcacgttaccgtaaccttgaaccacaagctgttaatgaacttgaaacaagtgaagaagct
gaaatagttgaagcaactgcaacaacagaagcagaataa
DBGET
integrated database retrieval system
