Streptomyces luteireticuli: AB8735_14185
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Entry
AB8735_14185 CDS
T11183
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
slua Streptomyces luteireticuli
Pathway
slua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB8735_14185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slua03019
]
AB8735_14185
03009 Ribosome biogenesis [BR:
slua03009
]
AB8735_14185
Enzymes [BR:
slua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AB8735_14185
Messenger RNA biogenesis [BR:
slua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB8735_14185
Ribosome biogenesis [BR:
slua03009
]
Prokaryotic type
rRNA processing factors
AB8735_14185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
XEZ40479
LinkDB
All DBs
Position
complement(3228782..3232798)
Genome browser
AA seq
1338 aa
AA seq
DB search
MLESTEPMEPGNAHSATGNDNADTGPGDTLPPRRRRRAASRPAGPPVAPPAGTPAALDEE
PAGPAQDAPAVTAGETPDADGAAPATPARPRRRAVRRAGTPGAPEAAAAAEPAEDAAAEA
RPRRRAVRKVTSPVTAVEQAEPVEPVAEPVAAEPVVDEAAATPERPRRRASAPAGAPKAA
EAAVAEPALAEAETVEAVEEEAQAPAAPARSRRRAVRRASAPAGAPVEAVEAAPAAVAEE
AEVTEAGEETSAEVAPAEAAPARPRRRAVRRASAPAGAPVEAVEPAPVVEAEEAEEAEEV
EEVEEAIEAVEEPVKPARTRRRATRAAGHAAVARPAEEPVVAGAVAEEPVAEEAPRGRRT
RRRVVSAEAGRAVETAEAAPAEAAPARSRRRAVRPPTAVFQAPVFTEPMFQTPESAAAAY
AAVEPAPVAEAEVEETEQPAGRRRRRRRGEAVEAAEPVVTAEVVEETEAEEPEAVEAAAE
DEEQGERPSRRRRRGGRRRRRGEAAEAEFEGAEEEPEGEQAEAAEESAEAEEAEEEAEES
GASTAGSRRRRRRRRRSGEPEAEPGTDEPERTVVKVREPRERTAGGTGFDEVQSIKGSTR
MEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQNGDRTQIGVLEDNVLVEH
FVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFDALGMGNGPRRI
ETALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERARL
KQILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQAQWEDIQKKSKMISTSSPSLLYGE
PDMTVRVVRDIFNEDFSKVVVQGDDAWETIHGYVSHVAPDLADRLQKWTSDVDVFATYRI
DEQLMKALDRKVWLPSGGSLVIDRTEAMVVVDVNTGKFTGQGGNLEETVTRNNLEAAEEI
VRQLRLRDLGGIIVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRK
RVGQGLLESFSEQCVHCNGRGVIVHMDQPAVAGGGGGGGKRGKKRGGGKAAAEAAVEPAA
ESAAVEPAAVEPAAVEQAEELEPAPVTEAELVPSVGGGEDEWFSSPAEAEAAATGGRGGR
TRRRATRKASAPAGAPKAAERVAAEVVVETVAPVAEPAPASAPAPEPVAEAVPEPAPEPA
PEAEAPAAPVRARRRVTRKASAPAGSPEGAEEAAVVVVAAPESESEPEPEVVLEEAEEAA
PAKKTARKTAAKKATTKKAAAKKTTTAKKAAAKKTTTAKKATTAKKAATKKTAAKKTTSA
AAKKAAAAAAESGAGADE
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaatccactgagcccatggaacccggaaacgcgcacagcgccaccgggaacgac
aacgcagacaccggtcccggcgacacgctgcccccgcggcgccgccgccgggccgcctcg
cgtccggccggtccgccggtggccccgcccgccgggacccccgccgccctcgacgaggag
cccgccgggcccgctcaggacgcccccgccgtgacggccggggagacgccggacgccgac
ggggccgcccccgccacccccgcccgcccgcgccgccgcgcggtgcgccgggccggtacg
ccgggcgctcccgaggccgcggctgcggccgagccggccgaggacgccgccgctgaggcc
cgcccgcgccgtcgcgcggtccgcaaggtcacctcgccggtcacggcggtggagcaggcc
gagccggtggagccggtggccgagcccgtcgcggccgagcccgtcgtggacgaggccgcg
gccacgccggagcgtccgcgccgccgggcgtccgcgccggccggtgcgccgaaggctgcc
gaggccgctgtcgccgagcccgctcttgccgaggccgagaccgtcgaggcggtcgaggag
gaggcccaggcccccgctgcccccgcgcgttcgcgtcgtcgtgcggtccgtcgggcgtcc
gcgcccgcgggtgctccggtcgaggccgtcgaggccgctccggcggccgtggccgaggaa
gccgaagtgacggaggcgggcgaagagacgtccgccgaggtcgcgcccgccgaggccgct
cccgcgcgtccgcgtcgccgtgcggtccgccgggcgtccgcgccggccggtgctccggtc
gaggccgtcgagcccgctccggtcgtcgaggccgaggaggccgaggaggccgaagaggtc
gaagaggtcgaggaggcgatcgaggcggtggaggagccggtgaagccggcgcgtacccgc
cgtcgtgccacccgtgccgccggccacgccgctgtggcccgtccggccgaggagccggtc
gtcgccggggccgtcgccgaggagcccgtggccgaggaggcgccgcgcggccgtcgtacg
cgtcgccgcgtcgtgagcgcggaggccgggcgggccgtcgagaccgccgaggccgctccc
gccgaggccgctcccgcgcgttcgcgtcgccgtgcggtgcgtccgccgacggccgtcttc
caggccccggtgttcaccgagccgatgttccagacgccggagtccgccgcggccgcctac
gccgccgtcgagcccgctccggtggccgaggccgaggtcgaggagaccgagcagcccgcc
ggccgccgtcgtcggcgccgtcgcggcgaggccgtcgaggcggccgagccggtggtgacc
gccgaggtggtcgaggagaccgaggccgaggagccggaggccgtcgaggccgccgccgag
gacgaggagcagggcgagcgtccgtcgcgccgtcgccgccggggcggccgtcgccgtcgc
cgcggcgaggccgcggaggccgagttcgagggtgccgaggaggagccggagggcgagcag
gccgaggccgccgaggagtccgccgaggcggaagaggcggaggaggaggcggaggagtcc
ggcgcgtccaccgccggcagccgtcgccgtcgccgtcgtcgccgccgttccggcgagccg
gaggccgagccgggcaccgacgagccggagcgcaccgtcgtcaaggtccgcgagccgcgc
gagcgcaccgctggcggcacgggcttcgacgaggtccagtccatcaagggctcgacccgc
atggaggcgaagaagcagcgccgccgcgagggccgcgagcagggccgccgccgggtgccg
atcatcaccgaggccgagttcctggcgcgccgcgaggccgtcgagcgagtgatggtcgtc
cgtcagaacggcgaccggacgcagatcggtgtgctggaggacaacgtcctcgtcgagcac
ttcgtcaacaaggagcaggcgaccagctacgtcggcaatgtgtacctgggcaaggtgcag
aacgtgctgccgtccatggaggccgcgttcgtcgacatcggcaagggccgcaacgccgtg
ctctacgccggcgaggtcaacttcgacgcgctcggcatgggcaacggcccgcgccgcatc
gagaccgcgctgaagtccggccagtccgtgctcgtccaggtcaccaaggacccgatcggg
cacaagggtgcccggctgaccagccaggtctcgctgcccggccggtacctggtgtacgtg
cccgagggctcgatgaccggcatcagccgcaagctgcccgacaccgagcgggcgcggctg
aagcagatcctcaagaagatcgtccccgaggacgcgggcgtgatcgtccgtaccgccgcg
gagggcgcgagcgaggacgagctgcgccgtgacgtcgagcggctccaggcgcagtgggag
gacattcagaagaagtccaagatgatctccaccagctcgccgagcctgctctacggcgag
ccggacatgaccgtccgcgtggtgcgcgacatcttcaacgaggacttctccaaggtcgtc
gtccagggcgacgacgcgtgggagaccatccacggctacgtctcgcacgtcgcgccggac
ctcgcggaccggctgcagaagtggacgtcggacgtcgacgtcttcgccacgtaccggatc
gacgagcagctgatgaaggcgctggaccgcaaggtctggctgccgagcggcggttcgctc
gtcatcgaccggaccgaggcgatggtcgtcgtcgacgtcaacaccgggaagttcaccggc
cagggcggcaacctggaggagacggtcaccaggaacaacctggaggcggccgaggagatc
gtgcgccagctgcggctgcgcgacctcggcggcatcatcgtgatcgacttcatcgacatg
gtgctggagtccaaccgggacctggtgctgcggcgcctgctggagtgcctgggccgggac
cggacgaagcaccaggtcgccgaggtgacctcgctgggtctggtccagatgacccgcaag
cgggtgggccagggcctgctggagtccttctccgagcagtgcgtgcactgcaacggccgc
ggcgtgatcgtccacatggaccagccggcggtggccggcggtggcgggggcggcggcaag
cgcggcaagaagcggggcggtggcaaggcggctgccgaggcggctgtcgagccggcggcc
gagtcggctgccgtggagccggccgctgtcgaaccggccgctgtcgagcaggccgaggaa
ctggagcccgctccggtgaccgaggcggagctggtgccgtccgtcggcgggggcgaggac
gagtggttctccagccctgccgaggcggaggcggcggcgacgggcggccgtggcggccgt
acgcggcgccgggcgacccgcaaggcgtcggctccggcgggtgcgccgaaggcggcggag
cgggtggcggcggaggttgtcgtggagacggtcgcgcctgtggccgagcctgcgcctgcg
tctgcccctgctcccgagccggttgccgaggccgtgcccgagcctgctcccgagcccgct
cctgaggccgaggcgccggcggcgcccgtccgggcgcgtcgtcgggtgacccgcaaggcg
tccgctccggcggggtcgccggagggtgccgaggaggcggctgtggtcgtcgtcgcggcg
ccggagtcggagtcggagccggagcccgaggtcgtgctggaggaggctgaggaggccgca
ccggccaagaagacggcccgtaagacggccgccaagaaggccacgaccaagaaggcggcg
gcgaagaagacgaccaccgcgaagaaggcggcggcgaagaagacgacgactgccaagaag
gcgacgacggcgaagaaggccgccacgaagaagacggcggcgaagaagacgacgtctgcg
gcggcgaagaaggctgcggcggcggctgcggagtcgggggcgggcgcggacgagtaa
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