Sander lucioperca (pikeperch): 116039377
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Entry
116039377 CDS
T07345
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116039377 (ret)
04020 Calcium signaling pathway
116039377 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sluc01001
]
116039377 (ret)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116039377 (ret)
Protein kinases [BR:
sluc01001
]
Receptor tyrosine kinases (RTK)
RET family
116039377 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
RET_CLD1
RET_CLD4
Pkinase
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116039377
NCBI-ProteinID:
XP_031140027
LinkDB
All DBs
Position
15:12413539..12436522
Genome browser
AA seq
1109 aa
AA seq
DB search
MGSSCGFSRGNIVVVVLLLLEGATGLYFPQNEYIETVYVGQQAGTPILQVHAMLDSDSER
PHFYLCWTSSIRRPVYSSWFNMDVNTGILSLNKTLEESDFALLYQHSWSVKKLFLHAIVL
PNFTKRSQCIRNSPRLTLDFVNATMPQCAQTDMKELCFPHRDTSNPHIMENRFPGALRQL
RRLTRLNVCPNYTISYNVQSDTPAPFAVNGNTTELVVTAPLDREESECYRLLLVCTVQTE
TLITKVETSLDVYVNDEDDNAPYVNGTDTADIIISFNRTKGGSFGALFVFDRDLTPIYPI
DQSHNKYVGTLLNNEPWIKETFDIKGTFSEKKATLGGIRETVHDYQLVLKKNLYVTENRT
LQLDYLVNDTTYPGLEGTVLLHFNVTILPVHIRFANITHMYTLTRRASVYAQVGRVCVEN
CQQFDGFRVTYRLEVPDKNMSADVQSCYAAVGITQAPDEMWGLLYVNDSEALRRPECQDL
QYLVVAQEENSQLEASTQLHIILDGEAKKASQESQQFLSCAENRRRGDCESVRGLGATTG
RCQWRQGSEKGISENYSTCSPDLRTCPDSFCDAVESKDTSICPQDCTKETVTGGHERGLR
NGIQAGYGTCYCYSERCFCEKEDIEEAICDDMCKTIIATALLLSFIVSILLSSFFIHRYH
KNSPKPPIASAEMTFRRPAQAYPISFPGNNLRRGSQESIETETFKIPEDPKWEFPRKNLV
LGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHP
HVIKMYGACSQDGPLYLIVEYAKFGSLRNFLRESRKVGPSYMGRDTNRNSSYLENPDDRA
LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY
VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK
TGYRMERPENCSEEMYNLMLRCWKQEPDKRQTFSDISKELEKMMVKSRDYLDLAASTPAD
ALLYDDALSEEDTPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRHDATNP
VFTRYANDSVYANWMALPSPAKAVDKLDS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaagctgtggtttctctcggggaaacatcgttgtggtggtgctgctgctgtta
gaaggagcgacagggctgtacttccctcagaatgagtacattgagacggtgtatgttggc
cagcaggcggggacgccgatcctccaggtccacgccatgctggacagcgactctgagcgg
ccgcatttctacctgtgctggacgagctctatcagacgcccagtctacagctcctggttc
aacatggacgtcaacacaggaatactgtctctgaacaaaaccctggaggagagtgacttc
gccttgctgtatcaacactcgtggtcggtgaagaagctgttcctgcatgccattgtgtta
cccaacttcaccaagaggtcccagtgcatcagaaactcccctcggctcacactggacttt
gtcaacgccacgatgcctcagtgtgctcagacggacatgaaggaactatgcttcccgcac
agagacacctccaacccccacatcatggagaacaggttcccaggggccctacggcaactc
cgacgtctcaccagactcaacgtctgccccaactacaccatctcttacaatgtgcaatca
gataccccagcaccatttgctgtaaatgggaacaccacagagctggtggtgacggctccg
ttggaccgcgaggagagcgaatgctaccgactcctgctggtttgcacagtccagacagaa
acgctgatcaccaaggtggaaacttcactggatgtttatgtcaacgatgaggacgataac
gcaccctacgtgaatggaacagacacagcagatattattatcagcttcaatcggacaaag
ggtggctcttttggtgctttgttcgtctttgacagggatttaacccccatctaccccata
gaccagagtcacaataagtatgtggggaccttgctcaataatgagccatggataaaggaa
acatttgacataaaaggcaccttcagtgaaaagaaagctactcttggaggaattcgagag
accgttcacgactaccagcttgtcctgaagaagaacctgtatgtgaccgagaatcgcacc
ctgcagctggactacctggtcaacgacaccacctaccccggtctagagggaacagtgttg
ctgcacttcaacgtcaccatcttacccgtccacatccgcttcgccaatatcacgcacatg
tacacattgacacgcagagcttctgtttacgctcaggtgggcagagtctgtgtggaaaac
tgccagcagttcgatggcttcagggtcacataccggctcgaggtgccagataagaacatg
tctgctgatgtgcagtcctgttatgcagccgtaggcatcacccaggccccggatgagatg
tggggactgctctatgtgaacgattcggaggcgctgcgcaggcccgagtgccaggacctg
cagtaccttgttgtagcccaggaggagaactcacagctagaggccagcacgcagctccac
atcatactagatggtgaagcaaaaaaggccagtcaggagagccagcagttcctgtcctgt
gcagaaaacagacggcgaggagactgtgagtctgtccgaggcctcggagccacaacaggg
agatgccagtggaggcaaggctctgagaaaggaatatctgaaaattactcgacctgctcc
cctgacctgcggacatgtccagatagtttttgcgatgcagttgaaagcaaagatacatca
atatgtcctcaagactgtacaaaggaaactgttactggaggtcatgaacgaggcttgagg
aacgggatccaggctggctatggaacctgctactgctactctgagagatgcttctgtgag
aaggaagatattgaggaggcgatatgtgacgacatgtgcaagaccatcattgccacggct
ctgcttctctccttcatcgtctccatcctcctgtcctcattcttcatccaccggtaccac
aagaactcgcctaaacccccaattgcctctgctgagatgactttccgccgaccagctcag
gcttaccccatcagcttccctggtaacaacttacgccgcggctcgcaggaatccatcgag
accgagacctttaaaatacctgaggatcctaagtgggagtttcctcgtaaaaaccttgta
cttggcaagactttaggagaaggagagtttgggaaagttgtcaaggcaacagcattccgg
ctgaaaggaaaagctggttacaccactgtggctgtgaaaatgcttaaagaaaacgcctcc
catagtgagctgcgtgacctgctgtcagaattcactttactgaagcaagtcaaccatccg
cacgtcataaagatgtatggagcatgcagccaggacggtccactgtatctgatcgtggag
tatgccaagtttggttcgctccgcaacttcctacgcgagagtcggaaagttggccccagc
tacatgggcagggacaccaacagaaactccagctacctggagaacccagacgacagggcg
ctaaccatgggtgacctgatctcttttgcatggcagatctccagaggcatgcaatacctg
gccgaaatgaagcttgttcacagggaccttgcggcacgaaatgtcctcgtagctgaagga
cgaaagatgaagatctcagactttggcctctccagagatgtgtatgaagaagactcctat
gttaagaggagcaagggccgtatacctgttaaatggatggcaatagagtccttgtttgat
cacatttacacaacacaaagtgacgtctggtccttcggtgtgctgttgtgggagatagtg
acactgggaggaaatccatacccaggtatcgctcctgaacgcctctttaacctgcttaag
actggctacaggatggagagaccagagaactgctcggaggaaatgtataacctcatgctt
cggtgctggaaacaagaaccagacaagaggcagacattctcagacatcagcaaagaactg
gaaaagatgatggtgaaaagtcgggattacctggacctggcggcgtccacgcctgccgac
gccctgctgtacgacgacgccctctctgaagaggacacgccactagtggactgtaataac
gcccctctccctcgaaccctcccctcaacatggattgaaaacaagctctatggcatgtca
tacccgaactggcctgagaagagcccggtaccgctcaacagacatgatgccactaatcca
gtctttacaagatatgccaatgatagtgtttatgcaaactggatggctttgccttcaccc
gcaaaagctgtggacaagcttgatagctaa
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