Sander lucioperca (pikeperch): 116040217
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Entry
116040217 CDS
T07345
Symbol
nalcn
Name
(RefSeq) sodium leak channel non-selective protein isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116040217 (nalcn)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
116040217 (nalcn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
TraP
FAM165
Motif
Other DBs
NCBI-GeneID:
116040217
NCBI-ProteinID:
XP_035860164
Ensembl:
ENSSLUG00000002363
LinkDB
All DBs
Position
8:15503645..15591251
Genome browser
AA seq
1771 aa
AA seq
DB search
MSWTGRHTAHKGNPPLSLSLWLVSPPLCDLGMNAPMRSLTIHSLYSTASPSMLKRKQSSR
VEAQPMTDFGPDETLADSADIFWINKPWVHSLLRACAIISVISVCMNTPKTFEHYPPLQY
VTFTLDTLLMFLYTAEMIAKMHIRGIIKGDNSYVKDRWCMFDGFMVFFIWVSLVLQVFEI
AELVDQMSPWGMLRIPRALIMIRAFRIYFRFELPRSRITNILKRSGEQIWSVSIFLLFFL
LLYGILGVQMFGTFNHHCVTNDTQRGNVTWNSLAIPDTHCSPDGEGYQCPHGFKCEDLED
LGLSRQELGYSGFNELGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLA
WLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDSAGGWQLVAVDVNKPH
GRAPACLQQLMRSSVFHMFILSMVAVDVIVAASNYYKGENYRRHYDEFYLAEVAFTVLFD
LEALLKIWCLGFTGYISSSLHKFESLLVVGTTLHIYPDLYHSQFTYFQVLRVVRLIKISP
ALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQI
LTQEGWVDVMDQTLVAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILDNLELDEDLKK
LKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPRIRESFMKQFIDRQ
QQDTSCLFRRLPSASSSSCDHSKRSAIEDNKYIDQKLRRSIFSIRARNLLEKETTINKIL
RACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSTSQRISRGKSLETLTQDHS
STVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVGREHRFRNFC
RMIVRARFNASKTDPITGAVKNTKYHQLYDLLGLVTYLDWVMIVVTICSCISMMFESPFT
RVMHAPTLQIGEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLC
WLPPDVPPESGAQLLMMLRCLRPLRIFKLVPQMRKVVREVLKGFKEIFLVSILLLTLMLV
FASFGVQLFAGKLAKCNDPHIIKRDDCHGIFRINVSVSKNLNLKLKAGEKKPGFWVPRVW
ANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTL
FVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPENGGFRAKMYDITQHP
FFKRGIAVLVLAQSVLLSVKWDVGYQATFPLATMSVVFTFIFVLEVTMKLIAMSPAGYWQ
SRRNRYDLLVTSLGVIWIVLHFSLLNAYTYMMGTCVIVFRFFTICGKHVTLKMLLLTVVV
SMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSTAGKAITVLFRIVTGED
WNKIMHDCMVQAPFCTPDKHRYWETDCGNYAGALIYFCSFYVIIAYIMLNLLVAIIVENF
SLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTSRVKFLLRLLRGRLEVDLDKDKL
LFKHMCYEMERLHSGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQ
TIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTLPSEDHNANNPDN
PSQPEMSGLQQLLSPTLSDRGGYRQDSSDLGKPQRKLGQWRLPAGRTSVKSIVCKINPVN
DEASSGSEVKKWWTRQLTVESDESGDDLIDI
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggacaggacgacacacggcacataagggaaatcctcctctctctctctctctc
tggttggtctctccacccctctgcgacctggggatgaatgcaccaatgaggagcctcaca
atccactctctgtatagcacggcaagtcccagcatgctgaagaggaaacagagttcacgg
gtcgaggcccagcccatgaccgactttgggccggatgagaccctcgcagacagcgctgac
atcttctggatcaacaaaccatgggtgcattccctgctgcgggcctgtgccatcatcagt
gtcatctctgtgtgtatgaacacccccaagacatttgagcattaccctccgttgcagtat
gtgaccttcacgctggacacactgctcatgttcctatacaccgcagagatgattgccaag
atgcacatcagaggaatcatcaagggggataactcctatgtaaaggatcgctggtgtatg
tttgatggattcatggtgtttttcatctgggtgtccctggtgctgcaggtgtttgaaata
gcagagcttgtggatcagatgtctccatggggaatgttgagaatcccccgagcgctcatt
atgatccgggccttcaggatctacttccgcttcgagcttcctcgctctcgcatcaccaac
atactgaagcgatctggggaacagatctggagtgtctccatcttcctgctgttttttctc
ctactctatggaattctgggtgttcaaatgtttggaacattcaaccaccactgtgttact
aatgatacacagagaggtaatgtgacatggaacagcttggccatcccagacacccattgt
tcccctgatggggagggctaccagtgtcctcatggcttcaaatgcgaggacctggaagac
ctgggcctcagccgacaggagctcggttatagtggcttcaatgaactaggtacgagtatc
tttactgtgtatgaggctgcatcacaggagggttgggtattcctcatgtacagagccatt
gacagcttccctcgctggcgctcctacttctactttattactctcattttcttcttggca
tggcttgtcaagaatgtgttcattgcagtcatcatcgagacatttgctgagataagagtg
caatttcagcagatgtgggggtcaaggagcagcaccacatctactgctacaacacagatg
tttcatgaagactctgctggggggtggcagcttgtagctgtggacgtcaacaaaccacat
ggccgagcgcctgcctgcctccagcaactgatgcggtcctctgtgttccacatgttcatc
ttgagcatggtcgctgtggacgtcatcgttgctgctagcaactattataaaggcgagaac
taccgcaggcactatgatgagttctacctggcagaggttgcctttactgtgttatttgac
ctggaagctcttctgaaaatctggtgtctgggctttaccggctacatcagctcctccctg
cacaagtttgaatctctcttggtggtcggcaccacgctgcacatctaccctgacctctac
cactctcagttcacctactttcaggtgctacgtgtggtgcgtttgattaagatttcccca
gctctggaggactttgtgtataagatatttggtccaggtaaaaaattaggcagcctggtg
gtgttcacagccagcctcctcatcgtcatgtcggccatcagcctgcagatgttctgcttt
gtggaggagctggaccgtttcaccacattccccagggcattcatgtccatgttccagatc
ctaacccaggagggctgggtagatgtcatggaccagactctggtggctgtaggtcatatg
tgggctccggtagtagccatttacttcatcctctaccatctgtttgctactctgattctg
ctcagtctttttgtggctgtaatcttggacaatctggagttggatgaagacttgaaaaag
ctcaaacagctcaagcaaagcgaagccaatgctgacaccaaagagaagcttcctctacga
ctcaggatctttgagaagtttcccaacagacctcagatggtgaaaatctctaagctccca
tctgatttcaccgtgcccaggatcagggagagttttatgaagcagttcatcgatcgtcag
cagcaggacaccagttgtttgttccggcgtctcccctccgcatcatcctcctcctgtgac
cactccaaacgctcagccattgaagacaacaagtatatcgaccaaaagcttcgcaggtca
atatttagtatccgagctcgtaacctcctggaaaaagaaactactatcaataaaatactg
cgggcttgtaccagacagcgtatgctaagtggatcctttgaaggccagccagccaaagaa
cgctccatactcagtgtccagcaccacatacggcaggagcgcagatctctgagacatggt
tccactagtcagaggatcagcagagggaagtcgctggagacactcacccaggatcattcc
agtacagtgcgctatcgtaacgcacagagagaggacagtgagattaagatgatccaagaa
aagaaagaacaagcagagatgaaaagaaaagtccaggaggaggaattgagagaaaatcat
ccttactttgataagcctctcttcattgtggggcgggagcaccgcttcaggaacttttgc
aggatgattgttcgagctcgcttcaatgcatccaaaactgaccccataacaggagcagtg
aagaacaccaaataccaccagctgtacgatctcctgggcctcgtcacctatttggactgg
gttatgattgtagtaaccatctgctcctgcatctccatgatgtttgaatcacccttcacc
agggtcatgcatgcccccacactgcagatcggggagtatgtgtttgtgatctttatgagc
attgagctcaacctgaagatcatggccgacggtctgttcttcacccccacagctgtcatc
agagacttcggaggagtcatggacatcttcatctatctcgtgagtctgatattcctgtgc
tggctgcctcctgacgtccctcctgagtctggggctcagctgctgatgatgctgcgctgc
ctgcgtccgctcaggatcttcaagctggtaccccagatgaggaaggtggtgcgggaggtt
ctcaaaggattcaaggagattttcctggtttccattctgctcctcactctaatgctcgtg
ttcgcaagcttcggagttcaactgtttgccggaaagcttgccaagtgcaacgacccccac
atcattaaacgggacgattgtcacggtattttccgaataaatgtcagcgtttccaagaac
ctcaacttgaaactgaaggctggagagaagaagcctggtttctgggtaccaagagtctgg
gccaaccctcgtaattttaactttgacaatgtgggaaatgccatgttggctttgtttgaa
gtgctgtccctcaaaggctgggtggaggtccgagatgtcattattcaccgcgtaggaccg
atccatggcatctacatccatgtctttgtgtttctggggtgcatgattggactcaccctg
tttgtcggcgttgttattgcaaacttcaacgagaacaagggcactgctctcctaacagtg
gaccagaggagatgggaggatctgaagagtcgactgaaaatagcccagcctctccacctg
ccccctcgcccagaaaacggggggttccgggctaagatgtatgatattactcaacatccc
ttcttcaaacggggcattgctgtgctggtgctggcacagtcagtgctgctgtcagtcaag
tgggacgtaggatatcaagcaacatttcctcttgccaccatgtcagtagtcttcaccttt
atatttgtactggaggtgaccatgaagctgatagccatgtctccagcgggttactggcag
agtagaaggaatcgctatgacctactggtcacatcattgggtgtcatctggatcgtcctg
cacttttccttactgaatgcatatacctacatgatgggcacatgtgtgattgtcttcaga
ttctttacaatatgtgggaagcatgtgactctgaagatgctgctgttgactgtggtagtc
agcatgtacaagagcttcttcatcattgtgggcatgttcctccttctcctctgctacgca
tttgctggcgttgttctctttggaactgtcaaatacggagagaacatcaaccggcatgcc
aacttctccacagcaggcaaggctatcaccgttctcttccgtattgtcacaggggaggat
tggaataaaatcatgcatgactgtatggtgcaggccccattctgtaccccggataaacat
cgctactgggagactgactgtggcaactatgctggagcacttatctacttctgctctttt
tatgtcattatagcctacatcatgctcaatctacttgtagccatcatcgtggagaacttc
tctctgttctactccactgaggaggaccagctgctgagctataatgacctaaggcacttc
caaatcatctggaacatggtggatgacaaacgggagggtgtgatccccacatctagggtg
aagttcctgcttcgtctcctccgaggcaggctggaggtggacctggacaaagacaagttg
ctgtttaaacacatgtgctatgagatggagcgactgcatagtggaggggatgtgaccttc
catgatgttctcagcatgctgtcatatcgctcagtggacattagaaagtctctccagctg
gaggagctgttggccagggaacagttggagtacaccattgaagaagaggttgccaaacag
accatacgcatgtggctcaagaaatgcctcaaacgcatccgggcgaagcagcagcagtcg
tgtagcatcatccacagcctgagagagagccagcagcaggagttgagccgcttccttaac
ccccccagcatagagaccaccttgccaagtgaagaccacaatgctaacaacccagacaac
ccttcgcagcctgagatgagtggtctccagcagctactcagccctacattgtcagacaga
ggaggctacaggcaggactcttcagacctggggaaaccacagaggaagctgggacagtgg
cgactgcctgcaggtcgcacaagtgtcaagtccatagtgtgtaagataaaccctgtcaac
gatgaggcttcttcagggtcagaggtgaagaagtggtggacccgtcagctgactgtggag
agcgacgagagtggcgacgacctcatcgacatttag
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integrated database retrieval system
