Sander lucioperca (pikeperch): 116040288
Help
Entry
116040288 CDS
T07345
Symbol
katna1
Name
(RefSeq) katanin p60 ATPase-containing subunit A1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116040288 (katna1)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
116040288 (katna1)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116040288 (katna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_14
AAA_33
NPHP3_N
TIP49
AAA_22
AAA_16
Mg_chelatase
AAA_7
IstB_IS21
nSTAND3
AAA_18
AAA_24
AAA_28
ABC_tran
PhoH
AAA_2
TsaE
RNA_helicase
SRPRB
HisK-N-like
AAA_30
AAA_17
Motif
Other DBs
NCBI-GeneID:
116040288
NCBI-ProteinID:
XP_035851667
Ensembl:
ENSSLUG00000011704
LinkDB
All DBs
Position
19:25970197..25997915
Genome browser
AA seq
509 aa
AA seq
DB search
MLLSYTSMAVADFRDVNTMSLREINENVKLAREYALLGNYSSASVLYHGLLDQIKKYVYT
VRDSSVQQRWQQLWQEISEENRQVQDIMSTLENFQLDTTPAKPSNHDDCEIRPVHVEQRH
SPCPVRRPANPYKDSKPPNNRLSVAVRAQQRHSSRGSNGDRSKLAKGKEKKESKEPKEAA
GKSKDDKNKADVQEKEVKKFDGTGYDKDLVEALERDIISENPNVKWDNIADLEDAKKLLK
EAVVLPMWMPAFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKY
RGESEKLVRLLFEMARFYAPTTIFIDEIDSMCSRRGTSEEHEASRRVKAELLVQMDGVGG
ASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAEGRVELLRINLKELEVAS
DVDLDKISEQMEGYSGADITNVCRDASLMAMRRRIEGLTPDEIRNISRDEMHMPTTMEDF
ESSLKKVSKSVSKSDLEKYEKWIEEFGSC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctattatcatatacatccatggctgtcgctgacttccgtgatgtaaacaccatgagt
ctaagagaaatcaacgagaacgtgaagctggcccgcgaatatgccttgctgggaaactac
agctcggccagtgttctctatcatggattactagatcaaatcaaaaagtatgtgtacact
gtgcgggacagcagtgttcagcagagatggcagcagttgtggcaagaaatcagtgaagag
aatcggcaagttcaggacataatgtcgactctggagaactttcagctggacacgacgcct
gctaaacccagtaaccacgatgactgtgaaataaggcctgtgcatgtggaacagagacat
tctccttgtcctgtcaggcgtcctgctaacccctataaagacagcaaacctcccaacaac
aggctgagcgtggctgtgagggcccagcagaggcactcgtctcgcgggtccaacggggac
aggagcaaactagccaagggcaaagaaaagaaggagtccaaagagccgaaggaggccgct
ggcaaatcaaaggatgataagaacaaagcagatgtccaggagaaggaagtgaaaaagttt
gacgggacaggatatgataaagacctcgtggaagctttggagagagatattatatctgag
aatccaaatgttaaatgggacaacattgcagacttggaagatgcaaaaaaactcctgaaa
gaagcggttgtgttgccgatgtggatgccagcatttttcaaaggcatacgaagaccatgg
aagggagtgcttatggtgggacctccaggcacggggaaaacacttttggctaaagcagtt
gctaccgagtgcagaaccacattcttcaacgtctcctcatctactctcacctccaagtac
agaggggagtctgagaagctagttcgacttctctttgaaatggcccgtttttacgctccc
actacgatcttcattgatgaaattgactccatgtgcagccgcagagggacttcagaggaa
catgaggccagccggagagtcaaggcagagctgctggtgcagatggatggtgtcggtgga
gcatcggaaaacgatgatccatcaaagatggtgatggtgttggctgccaccaacttccca
tgggacatcgatgaggctctgagaagacggctggagaagaggatctacatccctctgcca
tcagcggaagggcgagtggagctgctccggatcaacctgaaggagctggaggtggccagc
gacgtggacttggacaagatctccgagcagatggagggttactcaggagccgacattacc
aatgtgtgcagggatgcctctctgatggccatgaggcgaagaatcgagggcctcacccca
gacgagatccgtaatatttcccgggacgagatgcacatgcccaccaccatggaggacttt
gagtcttctctgaagaaagtgtccaaatctgtgtccaaatctgacctggagaagtatgaa
aagtggatcgaagagtttgggtcctgctga
DBGET
integrated database retrieval system
