Sander lucioperca (pikeperch): 116041060
Help
Entry
116041060 CDS
T07345
Symbol
si:rp71-17i16.4
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04020
Calcium signaling pathway
sluc04814
Motor proteins
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116041060 (si:rp71-17i16.4)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116041060 (si:rp71-17i16.4)
04820 Cytoskeleton in muscle cells
116041060 (si:rp71-17i16.4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116041060 (si:rp71-17i16.4)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
116041060 (si:rp71-17i16.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
EF_EFCAB10_C
EF-hand_11
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
116041060
NCBI-ProteinID:
XP_031142755
Ensembl:
ENSSLUG00000004928
UniProt:
A0A8C9XG12
LinkDB
All DBs
Position
12:16174551..16181018
Genome browser
AA seq
161 aa
AA seq
DB search
MPTDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDSAGRSEEELSECFRIFDKNGDGFIDREEFGEI
LHLTGEPVVEEDIDEMFGEADNNKDGRIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgacgcccaaagcgatgcccgctccttcctgactgaggagatgattgcagag
ttcaaagccgccttcgacatgttcgacaccgacggtggcggtgacatcagcaccaaggag
ttgggtcaggtgatgaggatgctgggccagaacccatcgagggaggagttggatgccatc
attgaggaggttgatgaggatggcagcggtaccattgacttcgaggagttcttggtcatg
atggtgcaacagttaaaggaggactcggctggaaggagtgaagaagagctttcagaatgc
ttccgcatttttgacaagaacggagatggtttcatcgaccgggaggagtttggagaaatc
ctccatctcactggagaaccagtggtagaggaagatattgatgagatgttcggtgaagca
gacaacaacaaagacggaaggattgattttgatgagtttctgaagatgatggagaacgtc
cagtaa
DBGET
integrated database retrieval system